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Detailed information on CNT0001219


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q9C6I8|NOG1_ARATH, E-value = 7e-12

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0017143, E-value = 6e-22 (S. tuberosum)

Expression of CNT0001219

Peptides detected in this lncRNA

>peptide 1 (39 aa)
LLLLSFESVCRLQQNRVHKTNPRTERFSGLIEHDGSVQS*

>peptide 2 (29 aa)
YFFFPLSQCAASNKTEFTRQTLEPNVFQG*

>peptide 3 (218 aa)
MVQYNLKKITVVPNGKDVVDIILSRTQRQTPTVVHKWFMFLIFFFYYDANEYFYYQKKMKLPLLVAMILPKIRFRMILSDLNPFGKLYQEKLWWQHHQLV
ASISPSKGIYILCIGIICSRFLLFQTIRFSSGQWNSQSTLPTNQSLIWYKIIFRNIMSLCTYLVPFVGLWSVPFPVYSTVKLRECYYGKNDFAGLYYFIF
FLSFGWCVMGSVTKWGED*

Sequence

>CNT0001219
CCTACTTCTTCTTTCCTTTGAGTCAGTGTGCCGCCTCCAACAAAACAGAGTTCACAAGACAAACCCTCGAACCGAACGTTTTTCAGGGTTGATAGAACAC
GATGGTTCAGTACAATCTTAAGAAGATTACCGTTGTGCCAAATGGGAAGGACGTGGTCGACATCATCCTCTCTCGCACCCAGCGTCAAACACCAACCGTT
GTGCACAAATGGTTCATGTTTTTGATATTTTTTTTTTATTATGATGCAAATGAATATTTTTACTATCAGAAAAAGATGAAATTGCCACTTCTTGTGGCAA
TGATTCTTCCAAAAATCCGCTTTCGAATGATTTTATCCGATTTAAACCCTTTTGGAAAATTATACCAAGAAAAGCTCTGGTGGCAACATCATCAATTAGT
AGCTAGTATTTCTCCCTCTAAGGGAATTTATATTTTATGTATTGGAATAATTTGTTCTCGTTTTCTTCTGTTCCAGACAATCAGATTTAGTTCTGGACAG
TGGAATTCACAATCTACCTTACCTACAAATCAATCCTTGATTTGGTACAAGATAATCTTTAGGAACATAATGTCTCTTTGCACTTATTTGGTTCCCTTTG
TTGGTTTATGGAGTGTTCCATTTCCTGTTTACTCAACTGTAAAATTAAGGGAATGCTATTATGGGAAAAATGATTTTGCTGGATTATACTATTTTATCTT
TTTCTTAAGCTTTGGTTGGTGCGTGATGGGATCAGTGACAAAGTGGGGAGAAGACTGAAAATAAACC