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Detailed information on CNT0012767


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q93YP9|ERDL4_ARATH, E-value = 2e-117

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0002863, E-value = 2e-16 (G. max)

Expression of CNT0012767

Peptides detected in this lncRNA

>peptide 1 (38 aa)
RLSVSLSSLLTANTCHLKTTNTIFFLANWSIPMTILLV*

>peptide 2 (249 aa)
MSFREENSEDGRGGDLRKPFLHTGSWYRMGSAQTSSMLGSSQVIRDSSISVLACVMIVALGPIQFGFTSGYSSPTQTAIVNDLKLTVSEFSLFGSLSNVG
AMVGAISSGQIAEYIGRKGSLMIAAIPNIIGWLSISFAKDLSFLYMGRLLEGFGVGIISYTVPVYIAEIAPQNLRGALGSVNQLSVTIGIMLAYLLGLFV
NWRVLAVLVEVPKSLTKSETDPHPFLIPCVELFPTEISSRCMSPQAMAT*

>peptide 3 (33 aa)
MRRTISNRNFFPLYVATSNGNMSSTSAVAVSGSS

>peptide 4 (32 aa)
VCLSLFQVFLQQIPVTLKRQTPFFFWLIGVSQ*

Sequence

>CNT0012767
CCGTCTGTCTGTCTCTCTTTCAAGTCTTCTTACAGCAAATACCTGTCACCTTAAAACGACAAACACCATTTTTTTTTTGGCTAATTGGAGTATCCCAATG
ACGATATTACTTGTCTGATTACCAAGAACTTTGTATTTCTGATCTATTACTGGTAAATCCCATCTGGGTTTTTCAATTCTTGAAAAAAAAAATGAGTTTC
AGAGAAGAAAATAGTGAAGATGGAAGAGGAGGGGATCTGAGGAAGCCATTTTTACATACTGGAAGTTGGTATCGAATGGGTTCAGCACAAACTTCTAGCA
TGTTGGGTTCTTCTCAAGTTATCCGTGATAGCTCAATTTCAGTTCTTGCTTGCGTTATGATTGTTGCTTTGGGTCCAATTCAGTTTGGGTTCACTTCTGG
TTACTCATCGCCTACGCAAACTGCCATAGTCAATGATCTGAAGCTCACAGTATCTGAGTTCTCTTTATTCGGTTCCTTATCTAATGTGGGTGCTATGGTT
GGGGCAATATCTAGTGGTCAAATTGCCGAGTACATTGGACGAAAAGGGTCTTTAATGATAGCTGCTATACCTAACATCATTGGTTGGCTTTCCATCTCGT
TTGCCAAAGATCTGTCCTTCTTATACATGGGAAGATTATTGGAAGGTTTTGGAGTTGGCATAATCTCTTACACGGTTCCTGTATATATTGCCGAGATAGC
ACCTCAGAACCTGAGAGGGGCCCTGGGGTCAGTTAATCAGCTCTCTGTTACAATTGGGATCATGTTGGCTTATTTGCTAGGACTTTTTGTTAATTGGAGA
GTGCTCGCTGTTCTTGTCGAAGTACCAAAATCGTTAACCAAATCCGAAACAGATCCCCACCCCTTTCTGATACCATGCGTCGAACTATTTCCAACAGAAA
TTTCTTCCCGCTGTATGTCGCCACAAGCAATGGCAACATGAGCTCGACCTCTGCTGTTGCCGTGAGCGGCAGCTCC