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Detailed information on CNT0013292


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q67XJ2|NFYBA_ARATH, E-value = 3e-72

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0001277, E-value = 3e-09 (G. max)

Expression of CNT0013292

Peptides detected in this lncRNA

>peptide 1 (71 aa)
MEKLRRMLRRLFRNVFLSSSASLLARQVTSARERKERLLMVTICYGQWQLLGLKIILNHSRCILLDTERWR*

>peptide 2 (37 aa)
MDMIVCSNNENHYLVLQLQDVASLWMNEVIYYLSFFPY

>peptide 3 (131 aa)
MADGQGSSRSPASPNGGGSHESGGDQSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLW
AMATLGFEDYIEPLKVYLARYREMEVSECLI*

>peptide 4 (38 aa)
MVKVRLGHRRVRTEVVVMRVVGTRVRGLTYVNRTGFYR*

Sequence

>CNT0013292
GAAGAATCCAAATACATGTGGAAGGAAGTAAAGAGAAAGAGTTTCTTTTTATATAGTTATAAAAATTTCAGTGTTTTCTTGTAAAACGAACGGTGTTGAT
AGGGCAAAATCCAAAACTCTGCCTCATCTCAGTCGTCTCCCTTTCTCCCTTCTTCTCCAACGTCCGATCTTCCAGTTCCCTCCATCCCCAGGTATGGCGG
ATGGTCAAGGTTCGTCTAGGTCACCGGCGAGTCCGAACGGAGGTGGTAGTCATGAGAGTGGTGGGGACCAGAGTCCGAGGTCTAACGTACGTGAACAGGA
CAGGTTTTTACCGATAGCTAATATTAGTAGAATCATGAAGAAGGCACTTCCTGCTAATGGAAAAATTGCGAAGGATGCTAAGGAGACTGTTCAGGAATGT
GTTTCTGAGTTCATCAGCTTCATTACTAGCGAGGCAAGTGACAAGTGCCAGAGAGAGAAAAGAAAGACTATTAATGGTGACGATTTGCTATGGGCAATGG
CAACTCTTGGGTTTGAAGATTATATTGAACCACTCAAGGTGTATCTTGCTCGATACAGAGAGATGGAGGTAAGTGAATGTCTAATATAATGTCTTTATTA
TCATTTCTTTTCTTTTTTCTTCTTTGCTTGTGGGAGCAACTGATTCATTTAGTAGGGTGACACAAAGGGAACGTCAAAGGCTGCTGATGGCTCTACTAAA
AGAGATGGGATGCAACATGGTCCTAATTCACAGGGTCAGCATATGATGGTCCCGATGCAAGGGACAGAGTAAAAATCCGATCTTCGTTCTGTTTGAGAAG
ACGGTGGACTTAAAAACATATTCTATATATAGATCTTCTGCTGTAACCTCTGTATCATGGTTTATTTATTCTAGTGCTCTCTAGTGAGTGCCATGTCATA
TTTAAAGTTTGTAAATTTAGGAGATGTTTAAGAAATATTATGGACATGATTGTTTGTAGTAATAATGAAAACCATTACCTAGTACTTCAATTGCAGGATG
TTGCTTCTCTATGGATGAATGAAGTTATATACTACCTCTCTTTTTTTCCTTAT