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Detailed information on CNT0013487


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|B0SY51|DHMA_CAUSK, E-value = 4e-13

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0023676, E-value = 3e-16 (A. trichopoda)

Expression of CNT0013487

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MRKFHGYSSLLFLFFTSQLTLSNCKVLSSSAKDFAIQLPIQ*

>peptide 2 (276 aa)
MILCNRWFCVESGSSNNSPILLIHGLPSQAYSYRKVLPILENNYHAIALDWLGFGFSDKPQPKYGFDYTLDEYVASLESVINALTDKKVTLVVQGYFSPI
AIKYASNHQEKLNGLILLNPPLTINHAKLPSSLSVLSNFLLGEIFCQDPLRASDKTLLSCGPYQIKEDVAMVYRRPYLTSGSAGFALNAISKAMKKQLKG
YVEDTRAILMDNNWSVQTTVCWGQRDRWLSFDGVEDFCKESKHRLVELPMSGHHVQEDSGEELGQLIAGIVGKRSSL

>peptide 3 (41 aa)
MIRRIICWMLLFQLGTAFLLAEGSIQMSQVRLMNGSTKENL*

>peptide 4 (37 aa)
MVQQRKICESLSGFWDWGESKGSHFWTYNGWEFAGVI*

>peptide 5 (116 aa)
MATLHSCSFSSLHSLPSLTVKYSRAQPRILRFNCRSSSDDKEDYLLDAPVSIGDGFSFSGGKYSDEPSPADEWFNKGKFVKAYPVSGTGEKAKDPIFGLT
MGGSSQASSDLFRVAH*

Sequence

>CNT0013487
ATTCGGAAAAAGATTACATCAATTTTTGAAATCTAAACGCTACATAAACTAGAAAATGATAAGTTGATTAGTCACTGCCCCAACAATATACTATAGGGTA
CATTTTGGAGAAAGAATTGCACCTCAAACTTGGCTATTTTTTGTGAACCAAAATAGTGAATGTGGAGAACCAGAGACACCCTATCTATCCCCCAACGCTA
GTATTTTAAATTTGGAAAACAAAACGATCATAACTGTGAGATGAGAAAATTCCATGGCTACTCTTCACTCTTGTTCCTTTTCTTCACTTCACAGCTTACC
CTCTCTAACTGTAAAGTACTCTCGAGCTCAGCCAAGGATTTTGCGATTCAATTGCCGATCCAGTAGTGATGATAAGGAGGATTATTTGCTGGATGCTCCT
GTTTCAATTGGGGACGGCTTTTCTTTTAGCGGAGGGAAGTATTCAGATGAGCCAAGTCCGGCTGATGAATGGTTCAACAAAGGAAAATTTGTGAAAGCTT
ATCCGGTTTCTGGGACTGGGGAGAAAGCAAAGGATCCCATTTTTGGACTTACAATGGGTGGGAGTTCGCAGGCGTCATCTGATCTTTTCAGGGTTGCCCA
TTGAATATGATTTTGTGCAATAGATGGTTTTGTGTAGAAAGTGGAAGCTCTAACAATTCTCCCATTCTATTAATCCACGGCTTACCATCACAGGCATACT
CTTATCGCAAAGTTCTTCCCATTCTTGAGAACAACTATCATGCTATAGCACTTGATTGGCTGGGATTTGGATTCTCAGATAAGCCCCAACCAAAATATGG
ATTTGACTATACATTGGATGAATATGTGGCATCCTTGGAATCTGTGATCAATGCTCTTACTGACAAAAAGGTTACTCTTGTAGTGCAGGGGTATTTCTCA
CCAATTGCAATCAAATATGCTAGCAATCACCAGGAAAAGTTGAACGGCCTGATACTTCTAAATCCGCCACTTACTATAAATCATGCCAAACTGCCGTCAA
GCTTATCTGTTCTGAGCAACTTCTTGTTGGGGGAAATTTTTTGTCAGGACCCTCTTAGAGCCAGTGATAAAACATTGCTGAGTTGTGGTCCTTACCAAAT
AAAAGAAGATGTGGCAATGGTTTACAGAAGACCTTATCTCACATCTGGTTCTGCAGGGTTTGCATTAAATGCGATAAGCAAGGCAATGAAAAAACAACTT
AAGGGCTATGTTGAGGACACAAGAGCAATACTTATGGACAATAACTGGTCAGTCCAGACAACAGTCTGCTGGGGACAAAGAGACCGCTGGTTAAGCTTTG
ATGGTGTAGAAGATTTCTGCAAGGAATCAAAGCATCGACTAGTTGAACTTCCTATGTCAGGACATCACGTTCAGGAGGATAGTGGTGAAGAATTAGGTCA
ACTCATTGCTGGAATTGTTGGAAAGAGAAGCAGTTTG