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Detailed information on CNT0014187


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0007023, E-value = 2e-10 (V. vinifera)
CNT0043803, E-value = 4e-15 (A. thaliana)
CNT0035263, E-value = 3e-09 (P. patens)
CNT0019112, E-value = 6e-14 (Z. mays)
CNT0024020, E-value = 3e-09 (A. trichopoda)
CNT0031085, E-value = 2e-10 (O. sativa)
CNT0036264, E-value = 1e-14 (C. reinhardtii)

Expression of CNT0014187

Peptides detected in this lncRNA

>peptide 1 (60 aa)
KIKYKYLENLFNDNKKLLKNFAVNLPSLGVTVPLPSAANHRAHRLFLTGAIPDAFFRCGG*

>peptide 2 (197 aa)
MPSSGAAVDPSIKSSSSIPNPEVEEDEDEEYEEIEVEEEIEVEEEIEVEEEEEEEMEVEEEVKEEGEEEEEEEEEEEEVGGEGSISPNVDDQKEEVEEEE
EEEEEEEEEEEEEEEEEEEEEVEEEEEKEEEEEVQGEGSIPMNVDDKKEEVEEEEEEEEEEEIQGEEEKGQGSSLLNVDDQKGISIEPLLSRAHIVC*

Sequence

>CNT0014187
AAAAAATTAAATATAAATATTTAGAAAATCTTTTTAATGATAACAAGAAGCTTTTAAAGAATTTTGCAGTGAACCTCCCATCACTCGGCGTCACTGTGCC
GCTTCCGTCCGCCGCGAACCACCGTGCCCATCGCCTCTTTCTTACCGGCGCCATTCCCGATGCCTTCTTCCGGTGCGGCGGTTGATCCATCTATCAAGAG
TTCATCATCGATACCTAATCCAGAGGTTGAAGAGGATGAAGACGAGGAATACGAAGAAATTGAGGTTGAAGAGGAGATTGAAGTTGAAGAAGAAATAGAG
GTAGAAGAAGAAGAGGAAGAAGAAATGGAGGTAGAAGAAGAGGTAAAGGAAGAGGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAAGTAGGAG
GTGAAGGATCAATTTCACCGAATGTAGATGATCAAAAAGAAGAGGTAGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAAGAAGAAGA
AGAAGAAGAAGAAGAAGAAGAAGTGGAGGAGGAGGAGGAAAAGGAAGAGGAAGAAGAAGTACAAGGTGAAGGATCAATTCCAATGAATGTAGATGATAAA
AAAGAAGAGGTAGAAGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAATACAAGGTGAAGAAGAAAAAGGTCAAGGATCAAGTCTACTCAATGTAGATGATC
AAAAAGGAATAAGTATTGAGCCACTCCTCTCGAGGGCACACATTGTTTGCTAATTTCTCTCAGCTTGAGCACTGTTTATGTAATTGATACAGCAGGTTGG
TCTCCGAATTGACTTGTGAAAAAACCCTAGTGTCATATGCTTAAACATCCGCGTGGTGCCATAAACGTAGTCCATGACCACCTTTTGTGTACATCCAATG
TACATTGAACGCTTGGATCAAACCCCTCTTTGACACCAGAATGTCATGTCCCTAAGAAATGTTACATCCTCTTTAGTTCTTCATTGATTCTGTTATTTGC
AGCAATTTGAATGACATGGAGACAGCTCTGTTGGTTTTAATAGGTATTGAGCTTTTGAAGGTTGTTCTAATGTGTTAATGTTCCAACTATCTTTAAGTTG
CTATCTTATTTTTAAGTGGATAAACTTCTTGATTTGTCTATTGGAAACCGCCTC