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Detailed information on CNT0014407


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|P93276|M030_ARATH, E-value = 1e-12

BLAST vs NONCODE (A. thaliana): nothing found

Potentially orthologous lncRNAs:
CNT0040425 in

CNT0032570 in O. sativa

Most similar lncRNAs:
CNT0005364, E-value = 4e-08 (V. vinifera)
CNT0040425, E-value = 7e-84 ()
CNT0032811, E-value = 7e-07 (P. patens)
CNT0032570, E-value = 7e-124 (O. sativa)

Expression of CNT0014407

Peptides detected in this lncRNA

>peptide 1 (29 aa)
SVIHGSPIGKPYPSSVASLRSLDFSNLAN*

Sequence

>CNT0014407
TCTGTGATCCATGGATCTCCGATCGGGAAACCGTATCCAAGCTCCGTGGCTAGTCTGCGCTCTTTGGACTTTTCAAACTTAGCGAACTGAAACATCTTAG
TAGCTAAAGGAAGGGAAATCAACCGAGACCCCGTTAGTAGCGGCGAGCGAGAGCGGATTGGGGTTTGAAGAAAAACAAACACGAAGCTTCGTTCCTCTCC
TTTTAGGCGAGCTACTTCGTTCCTCAGCAAAGTGTTCACTTCTTTTTCGCCAGGTTTCATTCGATTTGTTGTGGATTGGATGATGGAAAAACCAGCAAGC
TACGGCTTCAAAGCTTACCTTATTTAGAAAAGGAGAAAGGGCTTTTTTATAGATGTTGAGGTTGAGTAAGGGGGGCGGAGCTTGAAGAGCGAAGCGAGCC
GCGCTAGCCTAGCAACGTTTTTCAGCAGCAAGCTACGGTCTAACGACCCCCTAACCTAGGTTGGGGCGAAAACTCCAAAATCCAAAACGTTGGTTTTTCT
TCCTCTCCTTTCAGTCGAGTGACTTCGTACCTCTCCTTTTAGGCGAGCTACTTCGTTCCAAACCTTTCTCTAATAATAAGGTAAGCTTGAAAGCCGCCGC
CCTTTAAATTTAAAGGAGCGGGCGCAGTGAACTGTAATTGTGAAAAGATTGGAAGATCTGGCCAAAGAAGGTGATAGCCCTGTAGATTCGTTCCCATGGT
TCGATCCTTCCCAGTAAAACGCGGCGTGTTCGAATTCTGATCGCTTTTACGCGAGAAAGGGGGACCACCCTCTAAGCCTAAGTATTCCTCAATGACCGAT
AGCGTACAAGTACCGTGAGGGAAAGGTGAAAAGAACCCTATTTAGGGAGTGCAATAGAGAACCTGAGATCCGATGCGAACAATCAGTCGAAGGAGCGGAG
CTTAGAGCCTTTACTTTATGTAAAGCGCACTCACTCTAACGGCGTACCTAAT