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Detailed information on CNT0001509


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0005984, E-value = 7e-28 (V. vinifera)
CNT0042639, E-value = 9e-18 (A. thaliana)
CNT0018989, E-value = 4e-14 (Z. mays)
CNT0022204, E-value = 2e-22 (A. trichopoda)
CNT0031477, E-value = 6e-16 (O. sativa)
CNT0013103, E-value = 1e-29 (S. tuberosum)
CNT0037993, E-value = 4e-14 (S. moellendorffii)

Expression of CNT0001509

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MTFYAVMALMMILRSSGEGSFHLDFSLALLV*

>peptide 2 (54 aa)
RRPDPSKGLGFRIFHYKYPNKGFVATRSHSGIVFFRKFAIVEGSARAFVVQDES*

Sequence

>CNT0001509
CCCGACGACCCGACCCATCAAAGGGGTTAGGGTTTCGCATTTTCCACTATAAATACCCAAACAAGGGGTTTGTCGCCACACGTTCACATTCAGGAATCGT
TTTCTTCAGAAAATTTGCCATCGTTGAGGGAAGCGCGAGAGCCTTCGTTGTTCAAGATGAGAGCTAAGTGGAAGAAGAAGCGCATGAGGAGGTTGAAGAG
GAAGCGCCGAAAGATGAGACAAAGATCTAAGTAGGTGCTTGAACAAGGAGTGGAGATGATGTGCTTTTCCATCTGCTACCAGCTTCATGACATTTTATGC
TGTCATGGCTCTTATGATGATCTTGAGGTCTAGTGGCGAGGGGAGCTTCCATCTTGACTTTAGTTTAGCTTTACTGGTCTAAAGATTGCTGTTTTAGTGT
GGGTTAAGTTATGATATTGAGAGTTTTGTGTTATCTAATTATGTACTGGTACGTTTTGTATACTTTTTGGTTTATCTTAATAGCTTAAATATTAGTATTT
TGAGACGTGCATGAAAATTTGATCCTTTTTATGCATTATGTGACGACGCCTAAATCCTAATCATCAGCTCATATTAAATCATGTTTTGTGTGTAATTAGT
TTTATGTAGTGTTATAATTTCTTTTTTGAGATAGTTATGCATAATTATTTTGTATTAGGATATGTATCAATGAATTTTACGCTGAAGTGGGTGTCATGAA
TGTAAAATATATTTTGCACACAACCAAACAAAATTATTGCC