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Detailed information on CNT0016122


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|O48920|ARF_VIGUN, E-value = 3e-20

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0005385, E-value = 2e-17 (V. vinifera)
CNT0021669, E-value = 1e-06 (A. trichopoda)

Expression of CNT0016122

Nothing found.

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MKERGCVMHTSFNIRCSSSLASTTRSRSLLSTTKISPCVFWK*

>peptide 2 (50 aa)
PVALTEGVQTKLVGNLSSIHSIWKILLVSKHKQHSIPQFILCIHCKIHSK*

>peptide 3 (101 aa)
MLTKNRKLVNTDHFRLSSAPRTHFRMYLVYAPHQTWASPRHDIILNERTRVCDAYLIQHTMQLISSLNNTITIITINHKDKSLCVLEVMPPQWSDLEVQK
Y*

Sequence

>CNT0016122
TACCAGTGGCGTTGACGGAGGGAGTGCAAACCAAGCTTGTCGGTAATCTCAGCAGCATTCATAGCATTTGGAAGATCTTGCTTGTTAGCAAACACAAGCA
GCACAGCATCCCTCAGTTCATCCTATGCATACATTGCAAAATTCATTCAAAATAAGGTATGAGTGAAAGGAACCAACCCCAAGATGCTAACTAAGAACAG
AAAGTTGGTGAATACAGATCATTTCAGACTTTCAAGTGCTCCACGGACCCATTTCCGGATGTATCTTGTGTATGCACCCCACCAGACATGGGCCTCCCCA
AGACACGATATAATCTTAAATGAAAGAACGAGGGTGTGTGATGCATACCTCATTCAACATACGATGCAGCTCATCTCTAGCCTCAACAACACGATCACGA
TCATTACTATCAACCACAAAGATAAGTCCTTGTGTGTTTTGGAAGTAATGCCTCCACAATGGTCTGATCTGGAAGTGCAAAAATATTGACAAGGA