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Detailed information on CNT0016555


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q9XEA8|CYSK2_ORYSJ, E-value = 5e-16

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0016555

Peptides detected in this lncRNA

>peptide 1 (51 aa)
STRKALNSPLFLQIWEVSIKFHPRPDQRMVVAMNSAIQKYFSVTFCCRTFL*

>peptide 2 (105 aa)
MYTILKPFVYNLSQILWAVRQVIVWGGEAGGYGGWGEDEVCWSVGRTGHTQYRIPLVKLVFPNSIRKVVLLIFKQLVFLNKMFTKNFDQPNMENKKTYNE
FTLIC*

Sequence

>CNT0016555
GTCTACTAGGAAAGCTCTAAATAGCCCTCTTTTTCTGCAAATTTGGGAAGTCTCCATCAAATTCCATCCGAGACCAGACCAAAGAATGGTTGTTGCCATG
AACTCAGCCATTCAAAAATATTTTTCCGTAACGTTTTGCTGCAGAACCTTCCTTTGAGAAAAAGGGCATATAATCGTAATGATATCAGAACGGACATCAC
AAATGAAGCAGAGGACACATGCAGAAGTGATCTTTATTGACGGGTGAACTTACCAGCAGGCCTTCTTTCAATGCAAGAAGCTTTGTCATTTCAATAGCTT
CATCACTAGATACCTGAACATAAATAAAAGCAGAAGCTGCCATCATACCAGGAAATATAGCCAGTGAACCAAAAAATCAACAGCTTTAGAAACATACAAG
AGGACACTAAGGGTGTGTTCGGTATAAAGGAAGGAAAATAAGTGGTTTCTTACTAATTTTCTTGTGCTCGGTATGTATACTATCCTAAAACCATTTGTAT
ATAATCTAAGTCAAATACTATGGGCAGTGAGACAGGTAATAGTGTGGGGTGGTGAGGCTGGGGGCTATGGAGGTTGGGGTGAAGATGAGGTGTGTTGGAG
CGTGGGGAGGACAGGACACACTCAATATAGAATACCACTTGTGAAACTTGTTTTCCCTAATTCCATTAGGAAAGTCGTTCTCCTTATTTTTAAGCAACTT
GTTTTCCTAAACAAAATGTTTACCAAAAATTTTGACCAACCAAACATGGAAAATAAGAAAACCTATAATGAATTTACTTTGATCTGTTAATAAACTAAAT
CAGATGGATATGTTTCAGAGATAGAGTAAGCTGGAAACTTTTACATTGAAAAGCCACGATTATTCTGGAGATTCAGACAATTCTGTCAACAAAAGGATAT
ATCTAACTTTACCCTACAAAGCAATCTAGTCTATGTTCGCATACTTCATATCTCTGCTTCTGTGAGTCGTGAATGCGTTAGTTTTATATTAACCGAATTG
AAATTGTCAGTCAGAGTATAGCAGATTCATCACCTGGTTAGAGTCATTTGTAAGATATTCAGGTTTTTATAGCAAAATCTCACTCACATTGAGCAGAAAT
TTAAATGTTTGTAGAATCTCAGAGCTACTTATATGGTATACAGCCTTACTTGAAGAACTCCATCCAGGATGCTTTGATCGAGGACGGCTGAGATGAAACC
AGCACCAATTCCTTGAATTTTATGCGGCCCTTTAACAGTAATACATTTAATTACACACATATCAGTATTATATGATAAATAATAGTTCACAGAAGCAGAG
ATGAAAACACATTGGGTGAGAAATAAGATGGCAAAACTCTTAATTCAATGAGAGTATAGAAATGATGCAATGACATATTAGTTTCTATATTGATTTGGAT
ATTCTGAGAAGACACGGAAAGATGGAAACTTGACTGACCTAGTTGTCCTCCGTTTAGAATTGCATTTTCAGCTGGTTCTATACCATATACCTTTATTTCT
GGATTCTTCTCCTTAAGGAACCTTCCTGCTCCCGTCACCGTGCCTCCAGTCCCAATCCCTGCAATGAAAATATCAACTTTTCCTCCTGTGCTCTTCCATA
TTTCTGGTCCAGTTGTTTCATAGTGGATCTGTA