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Detailed information on CNT0016675


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|P32087|RR16_SOLTU, E-value = 3e-51

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0040395, E-value = 2e-41 ()
CNT0017270, E-value = 1e-55 ()
CNT0002248, E-value = 1e-89 (G. max)
CNT0021643, E-value = 1e-86 (A. trichopoda)
CNT0024794, E-value = 2e-79 (O. sativa)

Expression of CNT0016675

Peptides detected in this lncRNA

>peptide 1 (79 aa)
TYNLIEAVALSIYSFDPTLFCSVPRILTQFYTHLGTMKYFQNFPLIRHAIFTIHSLSGSVAVFQTLPRVWTNPSLHPYV*

>peptide 2 (35 aa)
MLFLPFIPFQDQSRSSKLYREYGRIPHFIHMCKRH*

Sequence

>CNT0016675
TTACCTATAATTTAATTGAAGCCGTAGCCTTATCCATTTATTCATTCGACCCAACTTTATTTTGTTCCGTTCCAAGAATTCTAACACAGTTTTATACCCA
TCTAGGAACAATGAAATATTTTCAGAACTTTCCGTTGATACGACATGCTATTTTTACCATTCATTCCCTTTCAGGATCAGTCGCGGTCTTCCAAACTTTA
CCGAGAGTATGGACGAATCCCTCACTTCATCCATATGTGTAAAAGACACTAGCCGCACTTAAAAGCCGAGTACTCTACCGTTGAGTTAGCAACCCGAAGA
AAATATCGAAAAAATTATGTAGAGCCAATTCGAAGAAAAAGAAATAACTAGAGTAGACAAGACAACCAAAAACCATTGAAAGAAGAAATCTAAAAAAATA
CATTTACACTTTCTAATTCATTTAAAACATAAAATAAAACTAAATAGATCCACTTCATTTATCACAATGAATTATATTTGTTCGATACACTGTTGTCAAT
ATAAATATTGAATATTGAAAAAAAAAAACAAAATAAATTTCAATTGAAAACAATAAAAAATAGTAAAAAAAGGGCTTGTGTTGGATTGGAACTACAAATC
TAATCCAAATAAAATAGATACAAAAAAGTATAGATGGGAGAATAAAAAAAAATAAGTGGAAAACAAAACTACAATTTACTTTAATTTACTTAGATTTATT
GAATTCATAATGGATTCAATCAAGTTAACTGAGATAAGCAAACTTGATTTCGTTCCGAAATGCCCAAATTTAATATTTTGAAGATCAATAAAATAAGAGG
TTTTGTCGTTATAGAACACGGAATTCACTGGAAGCAATGATAAATAAATACAAATAGAAAAGGAAAGGGAGGAAATACAAAAAAATAGAAGAGAAAAGTC
ATACAAAGTTATATACAAATCACTACCCCCTTTTTTGTATTACCTTAATTTATTTTCTTAATTGAATTTCGGTGGATTAAGACGAAGTTCCTTAAAAACC
TCTGCCTTCTTTAAAATATCCTGAACAGTTTCTGTAGGTTGAGCCCCTTTTTCAAGGAAATATAAAATAGCAGGAACATTTAAATAAGTTTGATTCTTTA
TCGGATCATAAAAACCCACTTTCTGAAGATCTTTTCCTTCTCTTCGGGATCGAACATCAATTGCAACGATTCGATAGACGGCTCGTTGCTTTCTACCACA
TCGTTTCAAACGAAGTTTTACCATAACATTCCTCTAAGAACCGGTATGGAATTGATTCAATTATGGAATCATGAATAGTCATTGGTTGGGCTGATGTATA
AACACCATAATCTAAAGTATTTTCTATATCTTCTATATCTATAGTCTATAGATATAAATAATACTATAGATATAGGTGGATAAATATTTTTCTGAAGAAG
TCTTAGTAAGA