Detailed information on CNT0016759


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|P36397|ARF1_ARATH, E-value = 1e-21

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs
: nothing found

Most similar lncRNAs
:
CNT0005385, E-value = 4e-14 (V. vinifera)
CNT0021669, E-value = 8e-06 (A. trichopoda)
CNT0027296, E-value = 4e-17 (O. sativa)

Expression of CNT0016759

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MCVSRTNRAARNREHNCGAKLFAAVIGSRILNIY*

>peptide 2 (31 aa)
MFLYSTVSTLNPDKERVIEDNIKINSLNQHK*

>peptide 3 (58 aa)
MVGIVVTISPSLSLYNMVVLPAASRPTIRIRISFLANSRLKSFPNDKPIFFQCLLDQN*

>peptide 4 (39 aa)
MINPSFFNACWTKIKIQLPHTFTYQSSLRQHILLNQEVT*

>peptide 5 (81 aa)
MNKCFLCRCLKLSSLYSFTTGHRRLVPEVRYCWFSFATRFSLQKEGVLASILLKNQLDLFFSGGTVDSFLLKVINFADQRR*

>peptide 6 (44 aa)
MGLFLDVSCVLHQTWATPRHNIILTEITRGGCCIPHSTSDAARL*

>peptide 7 (53 aa)
MGHPKTQYNLNRNNKRWVLHTSFNIRCSSSLASTTRSRSLLSTTKISPCVFWK*

>peptide 8 (30 aa)
MFWQKLLITKTKRQCSDHNDISVLQAIKHL*

>peptide 9 (29 aa)
MIQNKRSFLGFIFLLFWWLVSTNMKKSEK*

>peptide 10 (30 aa)
DSKDLLTSSIEKQHWERTSSLNLNKMLKAE*

>peptide 11 (41 aa)
MQLVSSLNNTVTIITINHKDKSLCVLEVMPPQWSDLEVPKN*

Sequence

>CNT0016759
GAGATAGTAAAGACCTGCTCACCAGCAGTATAGAAAAGCAGCACTGGGAGAGAACCTCAAGTCTTAATTTAAACAAAATGCTGAAAGCGGAGTAATTGAG
AATATGTAAACCCAGAGTGTAAAATATTACATGAATTCAACTAAAGTTACTGTAAAGTAACATTCTTTTAAAGAAAGGAAAATGTACTGAAAAAAATATA
GTGATAAGTGGATCTATCTCGCATAAGAAAGATAAGCAGGTGCACAAGTGCTCTAGACATTGTTGAAGTCTATATTGACAAAAATATAGCTGCAAAAATC
ATGGATCTCGTGTTCAACCCTGCAAAAACAAGGTCATTGGAAGATTAGAGCAAATTAAAGTGTCAAATAAAATCTAATATGATAATGTGCTCGTTCCCAT
ACCTTGTTAGCAATGTTGTTTGAGAGCCAGTCAAGCCCCTCATACAACCCTTCTCCAGAGGTAGCACATGTGCTCTGAATGTACCTGTAATAGAAAGTCA
TAGATTCAGCATTAGGTAGCACATGCAAGCCCGTATCAATCTCCAGCACCATGCTCAATAAGAACATATAATTTGATATCTTACAAATAAGGAAACACAA
AATAGTACATACCAGTGACGTTGACGGAGGGAGTGCAAACCAAGCTTGTCGGTAATCTCAGCAGCATTCATAGCATTTGGAAGATCTTGCTTGTTAGCAA
ACACAAGCAACACAGCATCTCTCAGTTCATCCTATGCATACATTGCAAAATTCATTCAAAATAGGGTATGAGTGAAAAGAACCAACTACAAGTTAACTAG
AACAGAAAGTTGGTAAATACAGATCATTTCAGACTTTCAAGTGCTCCATGGGACTATTTCTGGATGTATCTTGTGTATTGCACCAGACATGGGCCACCCC
AAGACACAATATAATCTTAACAGAAATAACAAGAGGTGGGTGTTGCATACCTCATTCAACATCCGATGCAGCTCGTCTCTAGCCTCAACAACACGGTCAC
GATCATTACTATCAACCACAAAGATAAGTCCTTGTGTGTTTTGGAAGTAATGCCTCCACAATGGTCTGATCTGGAAGTGCCAAAAAATTGACAAGGAACA
ACAGACAATATAAAGTAAGTCAATATCCGAAAGAAGTCATTGCATAACTGCAGATTCTAAACAAGTATGTACTTGATAGCAGCAAAGAACGCTAGAAGTC
GATGATACAGAACAAAAGATCATTTCTTGGTTTTATATTTCTGTTATTCTGGTGGCTGGTGAGTACGAACATGAAAAAATCAGAAAAATAAGCATGGTGA
ATTTGAAATACTAGTAATAGAAAGAAAATATAATTCCAAAACCAGAAATGCTCTTTCTATAACTCGCAACATGAAGTAAGGTCAGTATGAAGTCAGCCAA
ACTCAAAGTAGAAGCACTTGCAATCATCTTCTAATGTCAGATACTGAAAAGAGCATAGCACTTTGGTTAAGGCACTAAGTACCTTGTCCTGACCCCCAAC
ATCCCAGACAGTGAAGCTTATGTTCTTGTATTCAACAGTCTCCACGTTGAATCCTGATAAAGAAAGAGTTATTGAAGATAACATTAAGATCAATAGCTTG
AATCAGCACAAATAAGACATATGTGTGTCAGCAGAACAAACCGTGCTGCTAGAAACAGAGAACATAATTGTGGTGCAAAGCTGTTTGCAGCAGTAATTGG
ATCTAGAATATTAAATATATATTGAAACAGAACATAGGACAAATTTATGTAACAATTTACAAAAAACAAGCTAGTCATTCATGTAAAAAGTGATGCACCC
TTGCGCGGTAGCTGCGGAATAGCTTTCTGTGCCCTGATTTATCAACAAACGTCTTGAAGGGTACCTTATATCTTACTACATGCTGAAGATAGAAGTTTGG
CATGTTCTGAATTATCAAAAAAAGTTTGGGACGTCTCTTATATGTATAGTTTGCTGAAGAAAATGACCAACGAAGGATATAGGACCCATTTAACCCTATG
AACAAGTGTTTTCTATGTCGCTGTTTGAAGCTAAGCTCTCTTTACAGTTTTACAACTGGACATAGAAGGTTAGTCCCTGAAGTTAGATATTGCTGGTTTT
CATTTGCTACTAGGTTCAGTCTGCAGAAAGAAGGAGTCCTTGCAAGTATATTGCTGAAGAATCAGTTAGATTTATTTTTTTCTGGGGGCACAGTTGATAG
CTTCTTATTAAAAGTAATAAATTTTGCTGACCAGAGAAGGTAGTTTTGATTATTGACTTGTCTAGTTTGGAATTTTATTGGTGGTTAAACCAATGTGTTC
AACAAGCTCTACTACTATATAGTATTCCATTGGAGGCTATTGCAAAGAAACTCTGCAATACTATGATCGGGCAATGGATGTTTTGGTGATGGCATGTGTC
TAGCACATGTTCTAAGGATGTTTTGTATTCACATGGATACTTAAGGGTGTAGCTTAAATTGTAGGTATAATATAGAGATGTTTTGGCAGAAACTACTAAT
AACAAAAACAAAACGACAGTGTTCCGATCATAACGATATATCAGTTCTGCAAGCAATAAAACATCTATAGTACACACAACATAAATTACCAATGGTAGGA
ATAGTGGTAACAATCTCTCCCAGCTTGAGCTTGTACAATATGGTGGTTTTACCAGCTGCATCAAGACCCACCATCAGAATACGCATCTCCTTCTTGGCAA
ACAGCCGACTGAAAAGCTTCCCGAATGATAAACCCATCTTTTTTCAATGCCTGTTGGACCAAAATTAAGATTCAATTACCACACACATTCACCTATCAAT
CAAGCTTAAGACAACATATTTTATTGAATCAAGAGGTTACATAAATGCACAATACAAAATTATGATCTTAAGCCAACATAAAAATCCAAATTATGGCGTG
GTACTCCTCTTAACATACTGA