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Detailed information on CNT0016890


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q27IK7|POK1_ARATH, E-value = 3e-46

BLAST vs NONCODE (A. thaliana): nothing found

Potentially orthologous lncRNAs:
CNT0000890 in G. max

Most similar lncRNAs:
CNT0003632, E-value = 5e-17 (V. vinifera)
CNT0034809, E-value = 8e-16 (P. patens)
CNT0000890, E-value = 3e-15 (G. max)
CNT0025508, E-value = 5e-11 (O. sativa)

Expression of CNT0016890

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MLLVKLYHRKSFSELQGFPWWITACPVIIAACLHMVRLEVERLTQ*

>peptide 2 (92 aa)
YSRCLRQESAQTLVWLGHPETRFTFDHVACETISQEKLFRVAGFPMVDNCMSGYNSCMFAYGQTGSGKTYTMMGDIGEMSGKLSEQCGITPRI

Sequence

>CNT0016890
ATATTCTAGATGTTTAAGGCAAGAGAGTGCACAGACACTGGTTTGGCTTGGTCATCCTGAAACCAGATTCACCTTTGATCATGTTGCTTGTGAAACTATA
TCACAGGAAAAGCTTTTCAGAGTTGCAGGGTTTCCCATGGTGGATAACTGCATGTCCGGTTATAATAGCTGCATGTTTGCATATGGTCAGACTGGAAGTG
GAAAGACTTACACAATGATGGGTGACATAGGTGAAATGAGTGGAAAGCTAAGCGAACAATGTGGGATCACTCCTCGAATAT