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Detailed information on CNT0001721


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q68S07|PSAB_PANGI, E-value = 2e-90

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0024396, E-value = 1e-11 (O. sativa)

Expression of CNT0001721

Peptides detected in this lncRNA

>peptide 1 (166 aa)
MALRFPRFSQGLAQDPTTCCIWFGIATAHDFESRDDIIEECLYQNIFASHFRQLAIIFLWTSGNLFHVGGALSLVNIAYSGVYQWWYTIGLRTNEDLYTG
ALFLLFLYTISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTRHLIHVATSVSNSQ

>peptide 2 (35 aa)
MSLSKYFCFSFQAISNNFSVDFRESVSCRRCSKPS*

>peptide 3 (54 aa)
VIFHFSWKMQSDVWGSISDQGIVNHITGGNFAQSSITINGWLHDFLCTQASQVI*

>peptide 4 (68 aa)
MFVFSRRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG*

Sequence

>CNT0001721
TAGTAATATTCCATTTCAGTTGGAAAATGCAGTCTGATGTTTGGGGTAGTATAAGTGACCAAGGGATAGTAAATCATATCACAGGAGGAAATTTTGCGCA
GAGTTCCATTACCATTAATGGGTGGCTCCATGATTTCTTATGCACACAGGCATCCCAGGTAATTTAGTCTTATGGTTCTTCATTATCTGCATATGATCTT
TTTTTCTTGGGTGCACATTTTGTATGGGCTTTTAGTTTAATGTTTGTATTCAGCAGGCGTGGTTATTGGCAAGAACTTATTGAATCCATTGTTTGGGCTC
ATAATAAATTAAAAGTTGCTCCTGCTACTCAGCCTAGAGCCTTGAGCATTGTACAAGGACGTGCTGTAGGAGTAACACATTACCTTCTAGGTGGAATTGC
CACAACATGGGCATTCTTCTTAGCAAGAATTATTGCAGTAGGATAATAGCTAGGAGGATTTGAAAATCGTTATGGCATTAAGATTTCCAAGGTTTAGTCA
AGGCTTAGCTCAAGACCCCACTACTTGTTGTATTTGGTTTGGTATTGCTACCGCACATGACTTCGAAAGTCGTGATGATATTATTGAGGAATGTCTTTAT
CAAAATATTTTTGCTTCTCATTTCAGGCAATTAGCAATAATTTTTCTGTGGACTTCCGGGAATCTGTTTCATGTAGGAGGTGCTCTAAGCCTAGTTAATA
TAGCCTATTCTGGTGTTTATCAGTGGTGGTATACAATCGGTTTACGTACTAATGAGGATCTTTATACTGGAGCTCTTTTTCTATTATTTCTTTATACTAT
TTCTTTAATAGCGGGTTGGTTACACTTGCAACCAAAATGGAAACCAAGCGTTTCGTGGTTTAAAAATGCCGAATCCCGCCTCAATCATCATTTGTCAGGA
TTATTCGGAGTCAGTTCCTTGGCTTGGACAAGGCATTTAATCCATGTCGCTACAAGTGTTAGCAACAGTCAA