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Detailed information on CNT0017680


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0004738, E-value = 1e-06 (V. vinifera)
CNT0043075, E-value = 3e-07 (A. thaliana)
CNT0033570, E-value = 3e-07 (P. patens)
CNT0002798, E-value = 1e-06 (G. max)
CNT0024114, E-value = 3e-07 (A. trichopoda)
CNT0031443, E-value = 3e-07 (O. sativa)
CNT0011121, E-value = 1e-06 (S. tuberosum)
CNT0039778, E-value = 4e-06 (S. moellendorffii)

Expression of CNT0017680

Nothing found.

Peptides detected in this lncRNA

>peptide 1 (60 aa)
RETRTAARASQGTLHLSFPRSLSLLRRPRPSAPTPPVSPASACATIARSRTLGASRQPDK*

>peptide 2 (56 aa)
MEVLPQAWPWAACPPLQLSLSLSLSLDRRQRGDPRSALGEGTLGCVEWAVGERREGV

>peptide 3 (136 aa)
VRPAPPHAHHRVHSTSPSHAHSPCYDVRVHRHLRHPSPPRLPAPPSRGLGLSVPRVSLINESTRCRLSLITRHNTPMRQQWRSSPRLGRGPPVRLYNSLS
LSLSLWIGDNGETLGRHSAKGHSGVWSGPWASGEKGY

Sequence

>CNT0017680
CGTGAGACCCGCACCGCCGCACGCGCATCACAGGGTACACTCCACCTCTCCTTCCCACGCTCACTCTCCCTGTTACGACGTCCGCGTCCATCGGCACCTA
CGCCACCCGTCTCCCCCGCGTCTGCCTGCGCCACCATCGCGCGGTCTCGGACTCTCGGTGCCTCGCGTCAGCCTGATAAATGAAAGCACACGCTGTCGTC
TCAGTCTGATAACCAGACACAATACGCCAATGCGGCAACAATGGAGGTCCTCCCCCAGGCTTGGCCGTGGGCCGCCTGTCCGCCTCTACAACTCTCTCTC
TCTCTCTCTCTCTCTCTGGATCGGCGACAACGGGGAGACCCTCGGTCGGCACTCGGCGAAGGGACACTCGGGTGTGTGGAGTGGGCCGTGGGCGAGCGGC
GAGAAGGGGTACG