Detailed information on CNT0017823


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs
: nothing found

Most similar lncRNAs
:
CNT0043554, E-value = 2e-07 (A. thaliana)
CNT0033201, E-value = 6e-07 (P. patens)
CNT0000395, E-value = 3e-09 (G. max)
CNT0024260, E-value = 1e-08 (O. sativa)
CNT0010524, E-value = 1e-08 (S. tuberosum)
CNT0037290, E-value = 3e-09 (C. reinhardtii)

Expression of CNT0017823

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MLLLYFDDYCRMLLLCDYSECYYFMSDVLLG*

>peptide 2 (45 aa)
MGFSFHSELQLVYRPLTQTGVWIHDFANTHTHTHTHTYSRKEASI*

>peptide 3 (43 aa)
MSSTESGQLNRTRSMITAECYCFTLMITVECYCFVITQNATTL*

>peptide 4 (42 aa)
MILQTHTHTHTHTHIPGKKHLSELYTLKHCLKSLGSIELNLK*

>peptide 5 (31 aa)
SPCARSRTVRPQAADRPRLTREHRRRFFLSI*

>peptide 6 (31 aa)
MCFWDRLSKHMGTAECMLLQNADSLMSSVLL*

Sequence

>CNT0017823
CTAGCCCCTGCGCCAGGTCGCGGACCGTCCGGCCCCAGGCCGCGGACCGTCCGCGCCTGACCAGAGAGCACCGCCGCCGGTTCTTCTTGAGTATTTGACG
CTCCGAAAAGGCGTCAACAAGCTTTAAGTCAATAAAACAGCAATATGGTGGAAAAAAGAAGTATGCAGTTTTTTTCTTGATTCAAAGCACCTGCGGTACC
TTATTGTAAGCACCACTTGTTCTTGCAGTCTTAAATTGGCAGGATAATCTACAAACAAGTGTATTTTTACTTATACCTCATTGCTCTTAGCTGTGTTACG
ATGGAATGGAACAGCGGTAATGTAGTTCTAGTGGCTTTTGTGTATATATATTAAACTGTACTGATATGTTAGTGGTAGAATAGAGTGTTTCTGCCACTTA
CTTTACAAAGGTTTACTGTATATGTTGGTGCTAAAATAGGGTGCTGAATTTTGATGGGATTTAGTTTTCATTCTGAACTTCAGCTTGTCTACAGGCCCCT
CACTCAAACAGGTGTGTGGATTCATGATTTTGCAAACACACACACACACACACACACACACACATATTCCAGGAAAGAAGCATCTATCTGAACTGTACAC
TTTAAAACATTGTCTGAAATCATTAGGTAGCATTGAACTGAATCTGAAATGAGCTCAACTGAATCTGGGCAACTGAACCGAACTCGATCTATGATTACTG
CAGAATGCTACTGCTTTACTTTGATGATTACTGTAGAATGCTACTGCTTTGTGATTACTCAGAATGCTACTACTTTATGAGTGATGTGCTTTTGGGATAG
ACTGAGTAAACACATGGGAACTGCAGAATGTATGCTACTACAGAATGCAGATTCCTTAATGAGTAGTGTGCTTTTGTGATTACTGCAGAATACAGAATGC
AGGATGTGC