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Detailed information on CNT0018457


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q8LFJ6|NRPBA_ARATH, E-value = 3e-27

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0001739, E-value = 1e-14 (G. max)
CNT0040066, E-value = 1e-11 (S. moellendorffii)

Expression of CNT0018457

Peptides detected in this lncRNA

>peptide 1 (86 aa)
MALLASTRQPNINQRKRLERARAISRVYLETVFVASPTHLEHCRLVRYQSVARKNRQRWNTLCCFGSATKEATLMGISTLGICYMQ*

>peptide 2 (44 aa)
MLLWFSHKRGNVNGNIYPRYLLHAMISGFCLVATEVNSLALNHD*

>peptide 3 (51 aa)
MMSIRRWRYLPVPDNQTSINERDLKGQGQYREFTLRLSLLPRQLILSIAVW*

>peptide 4 (34 aa)
MIFHKSVTDVTVIDCSLLQPNIGLCNIITKHKVT*

Sequence

>CNT0018457
CGAGCACGACTGCGACTTAGGGTTTTGGTGGTGACGACGTTCCTTAGGGTTTTCATTTTTCGTTAGGTTATTGGGAACAAGTGGGATCTATACCTCGACC
TCCTCCAGGCCGACTACTCAGAAGGGGATGCTCTGGATGCTTTGGAATTGTTCCGCTACTGCTGCAGGCGAATGCTCATGACACATGTTGACCTCATTGA
GAAGTTGCTCAACTACAACACCCTAGAGAAGACCGAGACAAGTTAAGCGAGCACATCATGCTCCAAAAACACTACTGTTTGGCAGTATCATAGAGCTTAG
GTAGTATGTTGTCTCTTCTCTATCAGTAGAAATGGGTTGTGAGTGTGAACATGCTTTTCAAGGACTTTTCATGCGACAGTGCTTGTTGCCACCTATGCAA
CGATGTTGGATATTTTAAGTGATATAATTGCTAAAAGAAAGCTAATGTATTTGTGTGAATTGGGTCGATAATATTTCGTTGACAGATGTGCGTTTTTGGT
TGGACTACATTTAGTGATGCATGCTGGTACATATTTTATTATTGTATTCTATAACTCTAATCGACATTTCTGATACATAGGAGATATTGCTGTCTCTATA
TCCGAAGTATTAATATTATTCAATCACATGCGGCCGTTCTGGTAGACGTTCTAATGATGTCCATCAGGCGATGGCGTTACTTGCCAGTACCAGACAACCA
AACATCAATCAACGAAAGAGACTTGAAAGGGCAAGGGCAATATCGAGAGTTTACCTTGAGACTGTCTTTGTTGCCTCGCCAACTCATCTTGAGCATTGCC
GTCTGGTAAGGTATCAGTCCGTGGCCAGAAAAAATAGGCAACGGTGGAATACATTATGCTGCTTTGGTTCAGCCACAAAAGAGGCAACGTTAATGGGAAT
ATCTACCCTAGGTATCTGTTACATGCAATGATCAGCGGGTTTTGTTTGGTTGCAACCGAGGTGAACAGCTTGGCATTGAATCACGACTAGTGGGGAGCGG
TAATGATTTTTCACAAGTCTGTAACAGATGTCACGGTGATTGATTGCAGCCTATTACAACCAAACATAGGGTTATGCAATATTATAACCAAACATAAAGT
TACGTAAAAGATA