Detailed information on CNT0019011


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs
: nothing found

Most similar lncRNAs
:
CNT0006891, E-value = 5e-07 (V. vinifera)
CNT0042889, E-value = 5e-07 (A. thaliana)
CNT0035294, E-value = 2e-06 (P. patens)
CNT0023049, E-value = 1e-07 (A. trichopoda)

Expression of CNT0019011

Peptides detected in this lncRNA

>peptide 1 (109 aa)
LLSSLSLFFLGILLFCFPPQTSFNSTIDDDEDSAEKISPSQQRRTAGTYLEIQEAKKCQPSLHPSMLAMSTATIATLSWWYSLSLSLSLSLSFSISSHLF
PFVFFLRSC*

>peptide 2 (56 aa)
MKYEGQTGALLYISVYLSGPNSTHNSFPTSQFFCNKKKALVFPSPLQGHLLLYNRKK

>peptide 3 (55 aa)
VIILSLSLLSWYPSVLFSSTNLFQFNHRRRRRQRREDLAFTTTTNSGYVLGDPRS*

>peptide 4 (81 aa)
MVILFKCSLCVCAASFLSFFPLHSELPNCSKCSAMGTGSTVAMPLVLYKGLFYPVPKSNVPNNLFFRKCSDFMVKIWHHEI*

>peptide 5 (37 aa)
MKGKQEHYYTYLCTFLDQTAHIILSQRPNFFVTKKKL*

Sequence

>CNT0019011
GGTTATTATCCTCTCTCTCTCTCTTCTTTCTTGGTATCCTTCTGTTTTGTTTTCCTCCACAAACCTCTTTCAATTCAACCATAGACGACGACGAAGACAG
CGCCGAGAAGATCTCGCCTTCACAACAACGACGAACAGCGGGTACGTACTTGGAGATCCAAGAAGCTAAGAAATGTCAGCCCAGTTTGCATCCGAGCATG
CTTGCTATGTCAACTGCAACTATTGCAACACTATCCTGGTGGTATAGTCTCTCTCTCTCTCTTTCTCTCTCTCTATCTTTCTCGATCTCCAGCCACTTGT
TTCCTTTCGTTTTTTTTCTTCGAAGCTGTTAGCCTATGGTGATCCTGTTCAAGTGCTCTCTCTGTGTGTGTGCAGCGAGTTTCCTTTCGTTTTTTCCCCT
TCATTCAGAGCTACCCAACTGTTCCAAGTGCTCTGCCATGGGTACTGGTTCCACCGTAGCTATGCCTTTAGTCCTATACAAAGGCCTTTTCTACCCCGTA
CCCAAATCTAACGTCCCAAACAATCTGTTTTTCAGAAAATGTTCTGATTTCATGGTGAAGATTTGGCATCATGAAATATGAAGGGCAAACAGGAGCACTA
CTATACATATCTGTGTACCTTTCTGGACCAAACAGCACACATAATTCTTTCCCAACGTCCCAATTTTTTTGTAACAAAAAAAAAGCTTTAGTTTTCCCTT
CTCCCCTTCAAGGACACCTTTTACTATATAACAGAAAAAAAAA