Detailed information on CNT0019015


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs
: nothing found

Most similar lncRNAs
:
CNT0006229, E-value = 5e-11 (V. vinifera)
CNT0042615, E-value = 5e-11 (A. thaliana)
CNT0033040, E-value = 5e-11 (P. patens)
CNT0002871, E-value = 5e-11 (G. max)
CNT0023432, E-value = 1e-11 (A. trichopoda)
CNT0032070, E-value = 5e-11 (O. sativa)
CNT0008755, E-value = 1e-11 (S. tuberosum)
CNT0038248, E-value = 3e-09 (S. moellendorffii)

Expression of CNT0019015

Peptides detected in this lncRNA

>peptide 1 (57 aa)
MLKLILYSSLTLLVVGACLETKPLARGRSISLCKCRCRRGLEEALATRSKGLFWSRLF

>peptide 2 (29 aa)
MVFYIVPAPSVVLTLGCASISLKMVRPGS*

>peptide 3 (36 aa)
INYSPSLASPSCFRRASERASHRPREREREREREGE*

>peptide 4 (69 aa)
MADWGPVVIATVLFVLLTPGLLFQLPAHGRIVGFGTMHTSGVAILVHAVLYFALITIFLIAIGVHIYAG*

>peptide 5 (50 aa)
LITPPPLHHPAASDERASERATARERERERERERESESGDSSFKLTIEGG*

Sequence

>CNT0019015
ATTAATTACTCCCCCTCCCTTGCATCACCCAGCTGCTTCAGACGAGCGAGCGAGCGAGCGAGCCACCGCCCGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGGGAGAGTGAGAGTGGGGATTCAAGTTTCAAACTCACTATCGAGGGGGGATAGGAAGGTGGTCACTCATCGGTCCACAGCTAGCTCGTCGCCCCCCATG
GCTGACTGGGGCCCCGTGGTGATCGCGACGGTGCTGTTCGTGCTGCTCACGCCGGGCCTGCTGTTCCAGCTGCCGGCGCACGGCCGCATCGTCGGATTCG
GCACCATGCACACCAGCGGCGTCGCCATCCTCGTCCACGCCGTCCTCTACTTCGCGCTCATCACCATCTTCCTCATCGCCATCGGCGTCCACATCTACGC
CGGCTAGCTAGGGCCGGGTGTCTTCTAGTCCACACCCCCTTCGTCTCTTCCTCTCATCATCGGCCCCTGCTAGCTTCCTAGTCATGTACTACTACTAGTC
TTCGTTTGGCGGATGATGCGCGCATGCTAGCTTAGCTGCGGCGAACAATTAATCCGGACGCCGGATACCCCGCAGTATGTTGGTATTTATTATGGGATTG
TTATGGTGTTTTATATTGTTCCAGCTCCTTCCGTCGTCTTAACGCTTGGTTGCGCATCCATTTCACTGAAGATGGTCCGGCCGGGCTCTTGATTCAGTCT
GAACAGTTGTGTGTGTGTGTATGTGTTTATACAAGACTCAGAATGAACACTTACTGGCTGTTGGTTTGATTAGTCATTAGATCGAGATGGAATTAATTAT
GGATATACTTTAGCTGTTGGACTCGTTGGTGTTCGTGGACTACATCACGAAGATACGAAGATCAGTGTCAAGTTTTTTGGTATGGATTTATTTGTGTTCT
TAATTAATTTTAGTTTAAAATCAAATAGAAATACAGCCCGATTCAAATAAGATCCAGTCCGATGCTTAAATTAATTTTATATAGCTCATTAACACTTCTG
GTTGTCGGTGCTTGCTTGGAGACGAAGCCTCTGGCGAGGGGGAGGTCCATATCGCTTTGCAAATGTAGGTGCCGAAGGGGCCTCGAGGAAGCTCTAGCGA
CGAGGTCCAAGGGTCTCTTTTGGTCTCGGCTCTTC