Detailed information on CNT0019112


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q8RWY6|CLASP_ARATH, E-value = 0.0

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs
: nothing found

Most similar lncRNAs
:
CNT0043803, E-value = 5e-10 (A. thaliana)
CNT0032811, E-value = 2e-06 (P. patens)
CNT0031085, E-value = 5e-10 (O. sativa)
CNT0014187, E-value = 5e-13 (S. tuberosum)
CNT0036264, E-value = 1e-10 (C. reinhardtii)

Expression of CNT0019112

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MVCVVDAYLKLGPALLPYLEGLDSAQLQLITTHASRLSQARLIASDG*

>peptide 2 (51 aa)
MAAPGFSSSCGLYLEIYRERESVCYACGCCHLRACSVISIPCGLDVIGKKL*

>peptide 3 (124 aa)
MITTLCLALPVQQKAMENCVELLVVKLLHATKDGALKVMHSCSAWFGSHLLVQPQSWHLKPLFMSLSLQVVNQAHICLTTVVTQFDPLRCLGVSLFCIVV
KCCCLTTRNLVLLFFFFVCRRHCK*

>peptide 4 (44 aa)
MSRLMIVSVLHSSVSRIHLWKSRRTVLEGLRSNLLINLMGTKLK*

>peptide 5 (38 aa)
MQLVRSDQAQGHATGCSQGFGLTVRISCTHLLNHPDRK*

>peptide 6 (33 aa)
MLPKTAVRMSARLVHSGKSVFYFFSPPPDCFIW*

>peptide 7 (127 aa)
MRKEADEPAPVPCPVHPETGRYRKRDGECTGGWHDGVAEGRREGRRRQSSSGAESIRSVESKPKSSSASWHTWAMKQHRDCERHVTPNGQLQEKKISAVR
SIRNVIEENNTGIERKRRSGCLPTAAH*

>peptide 8 (56 aa)
MRFSEDNLMAHLPTFLPALVDASKNRSPYVRKVSPFREICFLFFFTSSRLLYMVKD*

>peptide 9 (146 aa)
MVLHVTCHAPTSGPPYPTVHGGYTTTTTRQPSSSPRSRSRSSTFPPLGPSVCRAPLPIAHCALRPLPWPSCHLPSLSLRIGPSQYPTLPLPLTAAAIVAL
SAPLHALPIHHSTAQHSATHDLAGATVLPHLQMSGLLPPAPRGTEH*

>peptide 10 (32 aa)
MKLKRKESGSRHRLGKKFLACSLKIRNQPGRR*

>peptide 11 (39 aa)
MVLVTNHQESVAARACTKKMRLVRRGCQLFARSLLKQSD*

>peptide 12 (59 aa)
MQERKTQSQTQTCQMTNTFTIRQSKWNLLIPAKQEKIPKRRSAQETSRFLQEKEILQGS*

>peptide 13 (106 aa)
WQCHPPRWRGCGSWCRRRGRRRSWSSTSPARPRSSSAAPASSALAAAVTATPGPRSRRSRHSALRAEGARCAAMPMGSLRWSSRASATDTRPCGRPRGGT
SCCSWR*

>peptide 14 (33 aa)
MEMEVKVNETDTGAIRVRMFPQQIQICLSQQKL*

>peptide 15 (46 aa)
MFRGRAACVVVVGVPPAPPYNARARPGRRRRRRRRRRRKKKNDALL*

>peptide 16 (31 aa)
MDRLYVITIGGYCTHLKISSLHPHKLCQGLP*

>peptide 17 (70 aa)
MAWLLPRCSLRRRIEMFLRPEKTGVILSRWQLIPQLRLKINKGIVRQEGISLLKGQTRLLKGLVRCLLKC*

>peptide 18 (42 aa)
MPVPKVIYMRSNSFWEKWSTTWMCPHLLQRHFLWVLTQDQIG*

>peptide 19 (49 aa)
MESAPGDGMMGWQKGEEKAAGGNHRAERSPSGRSNPSPSPVQPAGTRGR*

>peptide 20 (1103 aa)
MAMPPAAVARLRELVPAPGTEEELELDVAGAAALVECCSGLLRPGGGGDGDAGAALEALEALCAAGGGGAMRRHADGLAPLVVARLGDGHAAVREAARRY
LVLLMEMKEMNARTENTEPNSNVPNDQHVHYTTIEMESSNTSQARKNSKEKVSARDISLLAGEGDITRKLVEPIKVFSEKDLLREIGKVVSTLQPDNEWS
IRITAMQRVEGLVLGGAADYSAFPMLLKQLMTPLITQLLDRRSSVVKQACHLLNFLSKELLRDFEPYAELLIPVLLKNVVITILVIAESADNCIKEMLRN
CKVARILPRIIEFAKNDRSAVLRARCCEYATLMLEYWVDTPEIQRSADLYEDLIKCCIADATSEVRSSARACYRMFSRIWPDRSHQLYSSFEPPRQKMIN
DEDTETPQAHLPPVKISHLQPSSFVPAVIDKVVKVDSGISFSSGDLQTSDILYLQCDDIIAKGLDAGNNDDTLTIGSSFEDKITLRELETRDRDTEKNDS
GNSTGVNSSARDQPTATPITIEAPSEMSLDDATVVTIVQDKAECKLNVEPINQQVQAQEDPSDLTCLSPAVNSKGAGNLLKENPVEVSSDAGSSGKVGTH
KKSAVSKKPRGSYTPNFRRPLLSKQMTNWFYASTKSDIHEKQLILGEMVNNMDVPSSITEALSLGLNPRSDWMMKVYAFSFLRQCLLERGSKGTQEVAQN
FEKVMRLVCRYLDDPHHKVAHAALSSLADIMPVFKKPFEHYLDKTLPHIFSRLNDPKESIKQQCLAILKHANESYPIDSLLPALLRSLDEQKSPKSKLAV
LEFANASFVKCEVNSESYCSSSFLKPWFGKLAHLFNDKNKKLKEVTVVGFSSIYSHYDPTSMLSFLVTLSMEEQKRLKRAMKQLIPSIESDMEEFLQQKR
HKQKTPSFDIFTAKSPLHPAFQSAKSPLHPAHRSSKSPLHPRFAESPGHSAYKYAKSPLHPSYQPANSPLHPSYQSNYVKADDCFSSALQCLPDTSLEVQ
EDRTGRIEIESPNKSYGHKAEMMDKKSCTVRSKNDLPRRSDFSVISNNIVQNASSRDSRSTKILDEPNDSELHINTRKNKVTRTRNDLQDHEVIISHSSF
SLS*

>peptide 21 (36 aa)
MEIESSRGCMCTAIPAVPYGVGFGWLGCPVPSAVHE*

>peptide 22 (932 aa)
MKGAQDKRHRKKQDLQVLGPFPGCLGRMINMLDLSNGVVATKMLTEKAHRDVSPAGKDRSNTFKMAINPPAQTEDKQRDSQTRRNFPTKRSNSPTKRTGA
MPVKMLMEQDMWKERRPDEEPLNVVARLMGLHEPPGQQSNFPLGRQLDKKYQCGGFEENYWNLKSKKESKCHQNQKAGPRHQHTWNGSGDQPSRISSSQS
MHQENETCEKRMSIVREKFAEAKRLATDEKLLHSKEFQDALQFLSSNRDLFLEFLDEPNPLLSSNRYEFQPVAPPSEVKQITILKPSEPAKRKDSIFVGR
QLFSDGDGGESERNRYRRHQSSDVSPANSNLSEPTKIVVLKPGFPSSHDSRIARSSLSSAEDSEDESMMAVDETMCSRRLAKEITWQMRMRLKDRQDEES
MLSCEYPDFYIGDDSFSKSEVEIPKEMCGETSGELEFGTPTSGRSWDFLSRSGSPFSASCSSQASHRREPSVVREGKKKILERLSMVSSTVNIEEEMEGR
RSTGTLGDMLTISKVKDQEEIGAETLGSPAPELEPEEPFSCLPRSRSLPLSLSYGVAESNGITSGTHEAEKERIRKSSSFREKVSSLFSKNKKSTREKVD
PSVSNRLKHGGAVTTGDVKEICNHLALDNLQKQHTCLNTDEKNTVQGLVTSSCETNSAADIPAKDISSISSLGVPGIFGGLQDEPSPVSVLDGPFICDNN
RRLLYSSENFITSSPQALSRSPLIGSFSRSLSWEDPPLEVMSPNSLRLSRLFSKADEDLDSLTFIQKLVHSRGTGRESCILADPLDPSLLEKISDYEEDG
IKFGKRRPKQRLLFDAVNEALIELASMAELAAYPWGRSCSSEHGDCKNGSSSNSAAEEIWRVIRNWSILEKYPPGEAIERNLLLEMILKREVAEAASADT
TRLETFDLNTTVCAMVLDGLVEETVVDLTNYC*

>peptide 23 (57 aa)
MQLGMCISQIGRSPDLYPSFVSACDAILGGQPDGSSANVSSSTCGCFQKPQSVCPQG*

>peptide 24 (69 aa)
MSLFLQILATDFTKLDTTSSCTRFQNLHQMSSSLLEMLDDPDMATRELALSLLAEILEKHVSFFFSESR*

>peptide 25 (47 aa)
GNATRRGGAAAGAGAGAGDGGGAGARRRRRGRARRVLLRPPPPWRRR*

>peptide 26 (34 aa)
MKYCSDGFESKKKKVLCAGTWTGLDATPVDTTGW*

>peptide 27 (36 aa)
MTPSVNQKLRFQKRCVVKQVGNWSLALRLLAALGIF*

>peptide 28 (44 aa)
MWIGCDWKKIVKDFDLFGIEIHPFPPNPHGLRAKRTSPKVGSKG*

>peptide 29 (39 aa)
MASALVGLAAQCPVQCMNEEGSGRTCAGAVPCPPGDWTI*

Sequence

>CNT0019112
ATGGCAATGCCACCCGCCGCGGTGGCGCGGCTGCGGGAGCTGGTGCCGGCGCCGGGGACGGAGGAGGAGCTGGAGCTCGACGTCGCCGGCGCGGCCGCGC
TCGTCGAGTGCTGCTCCGGCCTCCTCCGCCCTGGCGGCGGCGGTGACGGCGACGCCGGGGCCGCGCTCGAGGCGCTCGAGGCACTCTGCGCTGCGGGCGG
AGGGGGCGCGATGCGCCGCCATGCCGATGGGCTCGCTCCGCTGGTCGTCGCGCGCCTCGGCGACGGACACGCGGCCGTGCGGGAGGCCGCGAGGAGGTAC
CTCGTGCTGCTCATGGAGATGAAGGAGATGAATGCAAGAACGGAAAACACAGAGCCAAACTCAAACGTGCCAAATGACCAACACGTTCACTATACGACAA
TCGAAATGGAATCTTCTAATACCAGCCAAGCAAGAAAAAATTCCAAAGAGAAGGTCAGCGCAAGAGACATCTCGCTTCTTGCAGGAGAAGGAGATATTAC
AAGGAAGTTAGTCGAACCTATAAAGGTTTTCTCTGAGAAGGACCTACTAAGGGAGATAGGAAAAGTAGTATCTACTTTGCAGCCAGATAATGAGTGGTCA
ATCCGGATAACTGCAATGCAAAGAGTGGAGGGTTTAGTGCTTGGAGGTGCTGCGGACTATTCGGCCTTCCCCATGCTCCTAAAACAGCTCATGACTCCTC
TAATAACTCAGCTTCTGGATAGGAGATCTAGCGTTGTAAAACAGGCATGCCATTTATTAAACTTCCTATCAAAAGAGCTACTACGTGACTTTGAGCCATA
CGCAGAGCTGCTTATTCCGGTCCTTCTTAAGAATGTCGTGATCACCATCCTTGTAATTGCTGAGTCTGCTGATAACTGTATAAAAGAGATGTTAAGGAAC
TGCAAGGTGGCTCGTATACTACCAAGGATTATTGAATTTGCAAAGAATGATAGAAGTGCTGTTCTTCGTGCCAGGTGTTGTGAATATGCAACACTAATGT
TAGAGTACTGGGTTGATACTCCAGAAATACAGAGATCAGCTGACCTGTACGAAGACCTTATAAAATGTTGTATAGCAGATGCAACTAGTGAGGTCCGATC
AAGCGCAAGGGCATGCTACAGGATGTTCTCAAGGATTTGGCCTGACCGTTCGCATCAGCTGTACTCATCTTTTGAACCACCCAGACAGAAAATGATAAAT
GATGAAGATACTGAGACACCTCAAGCGCATCTTCCTCCAGTTAAAATAAGTCATCTTCAACCTAGTTCTTTCGTTCCAGCTGTAATAGATAAAGTTGTTA
AGGTCGATTCTGGGATATCATTTTCTTCCGGAGACCTTCAAACATCAGACATACTATACCTCCAGTGTGATGATATAATCGCAAAAGGCCTAGATGCGGG
CAATAACGATGACACACTGACTATTGGAAGTTCTTTTGAGGATAAGATCACACTAAGAGAACTAGAAACTAGAGACAGAGATACTGAGAAAAATGATTCA
GGCAACAGTACAGGTGTCAATTCATCGGCTCGTGACCAACCAACTGCCACTCCCATTACAATAGAAGCACCTTCAGAAATGTCACTGGATGATGCAACTG
TTGTAACAATTGTTCAAGACAAGGCTGAATGCAAGCTGAATGTTGAACCGATAAATCAGCAAGTTCAAGCACAAGAAGATCCTTCTGACTTGACATGCCT
GTCACCTGCAGTTAACTCGAAAGGTGCAGGGAACTTACTAAAGGAAAATCCTGTTGAAGTAAGCTCTGATGCTGGATCAAGTGGAAAAGTAGGAACTCAT
AAGAAGAGTGCTGTTTCTAAGAAGCCACGTGGTAGTTACACCCCTAACTTCCGGCGACCTCTCTTGAGTAAGCAGATGACAAATTGGTTTTATGCCAGTA
CCAAAAGTGATATACATGAGAAGCAACTCATTCTGGGAGAAATGGTCAACAACATGGATGTGCCCTCATCTATTACAGAGGCACTTTCTTTGGGTCTTAA
CCCAAGATCAGATTGGATGATGAAGGTATATGCATTCAGTTTCTTAAGACAGTGTTTGCTAGAACGTGGATCAAAAGGCACTCAGGAAGTTGCACAAAAT
TTTGAGAAGGTTATGAGGCTTGTTTGTCGATATCTAGATGATCCCCATCACAAAGTGGCACATGCTGCTCTCTCTTCACTAGCTGATATCATGCCAGTTT
TCAAGAAGCCTTTTGAACATTATCTCGACAAGACACTGCCCCATATTTTCTCCCGGTTAAATGATCCAAAGGAATCAATCAAGCAGCAGTGCTTGGCAAT
TTTGAAACATGCAAATGAAAGTTATCCCATTGATTCTCTCTTACCCGCCTTACTTCGTTCGCTAGATGAGCAGAAATCTCCCAAGTCAAAACTGGCAGTT
CTTGAGTTTGCAAATGCCTCTTTTGTGAAATGCGAAGTCAATTCTGAAAGCTATTGTAGCAGCAGCTTCCTCAAGCCATGGTTTGGAAAACTTGCCCATT
TGTTTAACGATAAAAACAAGAAACTGAAGGAGGTTACAGTGGTTGGTTTCTCATCTATTTATTCTCACTATGATCCTACATCCATGTTAAGCTTTTTGGT
CACCCTGTCAATGGAAGAACAAAAGCGGCTAAAACGGGCAATGAAGCAATTAATACCATCAATAGAAAGTGACATGGAAGAGTTCTTGCAACAGAAGAGA
CATAAGCAAAAGACTCCATCTTTTGATATTTTTACTGCAAAATCACCACTTCATCCTGCATTTCAATCTGCAAAATCACCACTGCATCCTGCTCATCGAT
CTTCTAAATCACCACTCCATCCTCGATTTGCTGAGTCGCCCGGTCATTCCGCATATAAATACGCCAAGTCACCGCTGCATCCCTCGTATCAACCTGCTAA
CTCACCGCTGCATCCCTCGTATCAATCTAACTATGTCAAGGCTGATGATTGTTTCAGTTCTGCACTCCAGTGTCTCCCGGATACATCTTTGGAAGTCCAG
GAGGACCGTACTGGAAGGATTGAGATCGAATCTCCTAATAAATCTTATGGGCACAAAGCTGAAATGATGGACAAGAAGTCCTGTACCGTGAGGTCAAAGA
ATGATCTCCCGAGAAGAAGTGACTTCAGTGTGATATCAAATAACATAGTTCAGAATGCAAGCAGTAGGGACAGTCGGAGTACAAAGATACTTGATGAACC
AAACGACAGTGAACTGCACATAAATACCCGAAAAAACAAAGTTACGAGGACGAGGAATGATTTGCAGGATCATGAGGTAATCATTTCCCACTCATCTTTC
TCTCTCTCTTAAAATAGCACTTCTGCACATACATCAGATCTCTAAAAATTTTGACTAACCTGATGGTGTTTTGTTTGATAACTACAGTACTATTTAGTGT
GTTCTCTTTCTGCAACAGTTACATGCTATAAGTGTCCTATGAGCTTGTTTTTACAAATCTTGGCAACAGATTTTACAAAGCTAGACACCACCTCATCTTG
CACTCGTTTTCAGAATTTACACCAGATGTCTTCTTCCCTTCTCGAGATGCTTGATGACCCAGATATGGCCACAAGAGAGCTTGCACTTTCTCTGCTGGCT
GAAATCCTTGAAAAGCACGTAAGCTTTTTTTTTTCTGAGAGTCGTTAGCAGTGACTACTCGTCTGTTTACACGCGCCACCATTGGATACCGTTTCCCCAT
GATAACGACCCTTTGCCTTGCCCTTCCCGTCCAGCAGAAGGCGATGGAGAACTGCGTTGAGCTTCTTGTAGTTAAACTGCTGCATGCAACCAAAGACGGT
GCCTTGAAGGTAATGCACAGTTGCAGTGCTTGGTTCGGCTCGCATTTGCTGGTGCAACCACAAAGCTGGCATCTGAAGCCTTTATTTATGTCACTGTCGC
TGCAGGTTGTAAATCAGGCCCATATCTGCTTGACAACTGTGGTCACTCAGTTCGACCCACTCAGATGCCTTGGGGTAAGCTTGTTTTGCATCGTCGTTAA
GTGTTGCTGTTTAACTACAAGAAATCTTGTGTTGCTGTTTTTTTTTTTTGTTTGCCGTCGTCACTGCAAGTAATCTTGTGTTTCTCATGTAAACGTGCAG
GCCATCGCTTCTCAGCTGGCCAGCCAGGATGAGAAAGTTCTTATTGTAAGCATCAATAGTCTGAGCAAGGTATGTAGTCAGCCCACCAGGTTTTGCCGCG
CGCATTCATGTGTACAGCTCATCGTCTTGCCTTGACCCGTGTTAGGTGTGAGGGATGCAACTAGGCATGTGTATTTCCCAAATTGGACGCTCCCCTGATC
TCTATCCTTCCTTCGTTTCAGCTTGTGATGCGATTCTCGGAGGACAACCTGATGGCTCATCTGCCAACGTTTCTTCCAGCACTTGTGGATGCTTCCAAAA
ACCGCAGTCCGTATGTCCGCAAGGTTAGTCCATTCCGGGAAATCTGTTTTTTATTTTTTTTCACCTCCTCCAGATTGCTTTATATGGTAAAAGACTAAAA
GGTAGTAGGGAATTACTTAGGTAATAAATAAAAACCGGAGTATTGATCATATATGCCTTGCTGCTGTGTAGCATACTGACATTTTTTTTAAAAAAAACGA
GTAGCATACTGACAATAATACCATGTACTTGCTCTGAAGTCTGAACCATGCACACACATACAGACAATAATAGCATGTACTACGAGTAGTAGTAATTGTA
TTTGCTCGCCCCATCACAAAAAAGGAGGAGAAAATGATGGCATTGTGTTGGTCATTCATCGGCTGCAGGCTGCGATGGTGTGCGTGGTGGACGCGTACCT
GAAGCTGGGGCCGGCGCTGCTGCCGTACCTGGAGGGCCTGGACAGCGCGCAGCTGCAGCTGATAACCACCCACGCCAGCCGTCTGTCCCAGGCAAGATTG
ATTGCGTCGGACGGCTGACGCAGCGGGGCACGCCGGACGGGCCGGCCGGCCGAGGATGTTCCGGGGCAGAGCAGCGTGCGTCGTCGTCGTCGGCGTACCA
CCCGCTCCTCCTTATAACGCCCGTGCGCGCCCCGGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAAGAAGAACGATGCCCTGCTGTGACTAC
TGCGCTCCCAATTTATGAGCATACAGTAGACCGCACTGCGCTGCGGACGGAAGTGTACTGCGAGCAGCAATGGCTGCGCCTGGTTTTTCTTCTTCTTGTG
GCTTGTATTTAGAGATATATAGAGAGAGAGAGAGCGTGTGCTATGCGTGCGGCTGTTGTCATTTAAGGGCTTGTTCGGTTATTTCTATCCCATGTGGATT
GGATGTGATTGGAAAAAAATTGTGAAAGATTTTGACTTGTTTGGGATTGAAATCCATCCATTCCCACCCAATCCACATGGATTGAGAGCAAAACGAACAA
GCCCTAAAGTGGGAAGTAAAGGGTGAACAGTCAGTCGGTTATGAAATACTGCAGCGATGGATTTGAATCAAAAAAGAAGAAGGTTCTGTGTGCTGGAACC
TGGACTGGATTGGATGCTACTCCTGTAGATACAACAGGTTGGTGATCTGGTCTATGGAGATCGAGAGCAGCAGAGGCTGCATGTGCACCGCAATCCCTGC
CGTGCCGTATGGCGTCGGCTTTGGTTGGCTTGGCTGCCCAGTGCCCAGTGCAGTGCATGAATGAGGAAGGAAGCGGACGAACCTGCGCCGGTGCCGTGCC
CTGTCCACCCGGAGACTGGACGATATAGAAAGAGAGATGGAGAGTGCACCGGGGGATGGCATGATGGGGTGGCAGAAGGGCGAAGAGAAGGCCGCCGGCG
GCAATCATCGAGCGGAGCGGAGTCCATCAGGTCGGTCGAATCCAAGCCCAAGTCCAGTTCAGCCAGCTGGCACACGTGGGCGATGAAGCAACACCGTGAC
TGTGAGCGTCACGTCACGCCAAATGGCCAGTTGCAGGAGAAGAAGATTAGTGCAGTACGTAGTATACGTAACGTAATCGAGGAGAACAACACCGGTATAG
AAAGAAAGAGGAGAAGCGGGTGCCTGCCTACCGCGGCCCATTAATGGTGCTTCACGTGACCTGCCACGCCCCCACCTCCGGCCCCCCCTACCCTACTGTG
CACGGTGGCTACACCACTACTACTACTAGGCAGCCGAGCTCCTCGCCTCGCTCTCGCTCTCGCTCCTCCACCTTCCCTCCCTTGGGTCCGTCCGTTTGCC
GTGCGCCATTGCCCATTGCCCATTGCGCCCTGCGCCCCCTCCCTTGGCCAAGTTGCCATTTGCCTTCCCTTTCCCTCCGCATCGGCCCATCCCAGTATCC
TACCCTCCCCCTCCCACTCACGGCAGCTGCCATTGTCGCCCTGTCTGCCCCCCTCCACGCTCTCCCTATCCACCACAGCACAGCACAGCACAGCGCCACG
CACGATCTCGCCGGTGCCACCGTGCTCCCCCACCTTCAAATGTCGGGCCTCCTTCCACCGGCGCCCCGCGGCACGGAGCACTGAGCGCAGTCCGGTCCGG
CGCTGCCCCACTGCGACAAGGAGGACGGGCAAGCGCCGCCAGCCGCGCGGGGCCTCCGCTCTGCTCACCCTCGCCGCGGGGGAGACACACGGGGTAGGTG
CGGAGAGGACGCTAGATCCGCGCGCCCGACCGTCCCCGCCGCCTCCCACCGGCCACCGCACCGCCGCCGCCGGCGGTTCCCTCGTCGTCGCGCGCCAGCG
CAGCTGCTGCAGTGCAGGAAGGGACGGTGTGAATGAAAGGCGCTCAGGATAAAAGGCACAGAAAGAAGCAGGACCTCCAGGTTCTCGGGCCCTTCCCGGG
ATGCCTGGGGAGGATGATCAACATGTTAGACCTCAGCAATGGCGTGGTTGCTACCAAGATGCTCACTGAGAAGGCGCATAGAGATGTTTCTCCGGCCGGA
AAAGACCGGAGTAATACTTTCAAGATGGCAATTAATCCCCCAGCTCAGACTGAAGATAAACAAAGGGATAGTCAGACAAGAAGGAATTTCCCTACTAAAA
GGTCAAACTCGCCTACTAAAAGGACTGGTGCGATGCCTGTTAAAATGCTGATGGAGCAGGACATGTGGAAAGAAAGACGGCCTGATGAGGAGCCACTGAA
TGTTGTTGCAAGATTAATGGGCCTACATGAGCCTCCAGGTCAGCAATCCAATTTCCCTTTAGGAAGACAATTGGATAAGAAATATCAGTGTGGTGGTTTT
GAAGAGAACTACTGGAATCTCAAGTCAAAGAAGGAAAGCAAATGCCACCAAAACCAAAAGGCAGGGCCACGCCATCAGCACACTTGGAATGGTTCTGGTG
ACCAACCATCAAGAATCAGTAGCAGCCAGAGCATGCACCAAGAAAATGAGACTTGTGAGAAGAGGATGTCAATTGTTCGCGAGAAGTTTGCTGAAGCAAA
GCGACTAGCCACAGATGAGAAACTTCTTCATTCGAAGGAGTTCCAAGATGCACTGCAGTTTTTAAGCTCAAATAGAGACCTATTCTTGGAGTTCCTTGAC
GAGCCAAATCCTCTATTATCAAGCAACCGTTATGAGTTCCAACCTGTTGCACCACCTTCTGAAGTAAAGCAAATAACCATACTGAAGCCATCAGAACCAG
CAAAGAGAAAAGACAGCATCTTTGTGGGGAGACAACTGTTTTCAGATGGAGATGGAGGTGAAAGTGAACGAAACAGATACAGGCGCCATCAGAGTTCGGA
TGTTTCCCCAGCAAATTCAAATTTGTCTGAGCCAACAAAAATTGTAGTACTAAAACCAGGATTCCCCAGTTCTCATGACTCCAGGATTGCGAGGTCTTCA
TTATCATCAGCAGAAGACAGTGAAGATGAAAGTATGATGGCGGTTGATGAAACCATGTGCTCAAGAAGGTTGGCAAAGGAGATCACTTGGCAGATGAGGA
TGCGGCTAAAAGACAGGCAAGACGAAGAGAGTATGCTCTCATGTGAATACCCTGACTTTTATATCGGAGATGACTCCTTCAGTAAATCAGAAGTTGAGAT
TCCAAAAGAGATGTGTGGTGAAACAAGTGGGGAATTGGAGTTTGGCACTCCGACTTCTGGCCGCTCTTGGGATTTTCTGAGTAGAAGTGGAAGTCCTTTC
TCTGCGTCATGCTCTAGTCAGGCATCCCATAGAAGGGAGCCGTCAGTAGTTAGGGAAGGCAAGAAGAAGATTTTAGAGAGATTGTCTATGGTATCATCAA
CAGTCAATATTGAGGAAGAAATGGAAGGTCGCAGAAGTACAGGCACACTTGGTGACATGCTCACAATATCGAAAGTCAAGGACCAGGAAGAAATTGGGGC
TGAAACACTGGGGAGCCCAGCACCTGAGCTGGAACCTGAGGAGCCTTTCTCATGTTTGCCAAGATCTCGATCCCTTCCACTTTCTTTGTCCTATGGAGTC
GCTGAGTCAAATGGAATAACCTCTGGCACTCATGAAGCTGAAAAGGAAAGAATCAGGAAGTCGTCATCGTTTAGGGAAAAAGTTTCTAGCCTGTTCTCTA
AAAATAAGAAATCAACCAGGGAGAAGGTAGATCCATCTGTGAGCAATAGACTCAAACATGGAGGGGCTGTGACTACTGGTGATGTGAAGGAAATCTGCAA
CCATCTTGCCCTAGACAATCTTCAGAAACAACATACTTGTCTAAACACAGATGAGAAGAACACTGTGCAAGGACTCGTGACTAGTTCTTGTGAGACCAAT
AGTGCAGCTGATATCCCTGCCAAGGATATTTCCTCCATTTCAAGTCTTGGTGTCCCAGGAATCTTTGGTGGCCTTCAGGATGAACCTAGTCCTGTATCTG
TACTAGATGGACCGTTTATATGTGATAACAATAGGAGGCTACTGTACTCATCTGAAAATTTCATCACTTCATCCCCACAAGCTTTGTCAAGGTCTCCCCT
GATCGGATCATTTTCACGGTCACTGTCATGGGAGGATCCCCCGCTGGAAGTCATGTCGCCGAATTCGTTGAGACTCTCAAGGCTTTTCTCGAAGGCTGAT
GAAGATCTAGATTCACTGACGTTTATCCAGAAGCTGGTCCACTCTCGAGGCACGGGTCGAGAAAGTTGCATATTAGCTGACCCTTTGGACCCGAGTTTGC
TCGAGAAGATTTCGGATTACGAAGAAGATGGAATTAAGTTTGGGAAAAGGCGGCCCAAACAGAGGCTCCTTTTCGACGCCGTAAACGAAGCGCTCATCGA
GCTTGCTTCGATGGCGGAACTGGCTGCGTACCCCTGGGGTAGATCATGCTCTTCGGAGCACGGGGATTGCAAGAACGGTTCCAGCAGTAATTCTGCGGCT
GAGGAAATCTGGCGGGTCATTAGGAACTGGTCGATACTTGAGAAGTACCCTCCCGGTGAAGCTATTGAAAGAAATCTCTTGCTGGAGATGATACTAAAGA
GGGAGGTGGCGGAGGCAGCCAGCGCTGACACGACTCGGTTAGAGACGTTTGATCTCAACACCACGGTCTGCGCCATGGTCTTGGATGGCCTGGTTGAAGA
GACAGTTGTAGATCTGACTAACTACTGCTAGTGAGGTACCTCTGCCCTCTAACTAATAATCTCGCGCTCTGCTCCCTAGTGTTGGTGTTTGGTGTGATAC
TTGCTGCCGTAACACTGCTCCATGCTATTACTCGCTCAAATGTGATGCCAAATAAATGGGTCTCTACGTTGTTTACGTTTCTGTTTTGATCTCTTCTACC
GTGGTATTTGTTCTAG

lncRNA-RNA interactions

Number of interactions: 6

Potential function Interacting transcript Gene description Transcript biotype lncRNA id Alignment score (LAST) Alignment length Transcript region involved in interaction Genomic orientation of interacting RNAs
GRMZM2G056393_T02 Uncharacterized protein protein coding CNT0019112 259 147 UTR3 Trans
GRMZM2G086277_T01 Zinc finger, C2H2 type family protein isoform 1; Zinc finger, C2H2 type family protein isoform 2 protein coding CNT0019112 222 150 UTR3 Trans
GRMZM2G171476_T01 Uncharacterized protein protein coding CNT0019112 187 119 UTR3 Trans
GRMZM2G180926_T01 protein coding CNT0019112 225 140 CDS Trans
GRMZM2G381138_T01 Uncharacterized protein protein coding CNT0019112 405 225 CDS_UTR Trans
GRMZM2G540491_T01 Uncharacterized protein protein coding CNT0019112 111 140 UTR5 Trans