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Detailed information on CNT0001940


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0003759, E-value = 4e-06 (V. vinifera)
CNT0028701, E-value = 7e-08 (O. sativa)
CNT0035597, E-value = 1e-06 (C. reinhardtii)

Expression of CNT0001940

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MPQLPLLLKFRLPPFSSIGKRFVGPSKVTEDMDTDR*

>peptide 2 (60 aa)
MVHGSFITFFQFHKYFGLPSFNLLIQFIYKIHHLIPSPFHLMLMFHVLLSLNHITSKITL*

>peptide 3 (79 aa)
MTESKEATLLEAEKISCRKSEVDFKFLCFLLVSQVKNWEVTHSCFWDLLFFIIIIIIIIKSCFRKLDDLMVQLLQQLRL*

>peptide 4 (37 aa)
FTRKLRELVPEQAKSHTSITCHSFLYCSNSGCHRFPP*

Sequence

>CNT0001940
GTTTACGCGTAAGTTGAGGGAGCTGGTGCCGGAGCAAGCAAAAAGCCATACCTCAATTACATGCCACAGCTTCCTTTATTGCTCAAATTCAGGCTGCCAC
CGTTTTCCTCCATAGGAAAGAGATTCGTGGGACCATCGAAGGTTACAGAGGATATGGATACTGATCGTTAAATTCATTAACCACTGGCATGAGATCAAAG
CAGCACCTCTAGCAAGGAAGAATAGTTGGCAACTAACCATCATTAACCTTGGACTGAGCAGCTTCCATTCTCACTTGTTAAAGGCCCGAGATGGTTTTCC
CTTTGCTGGTCTTATTGATTTACAAGGTGCTTTGATAAAGAGGTGTTTGGGTCTAAAAACTCTTAATCAAAGAAGAAAATGTTTCACCAAAAGAAAATCA
AGGGTATGTAATCATTTTGTGTTGGTGCCTAATCAATCTTGATATGAAATAAAAGGGTACAAAATTGGAAATCGGTTGCTTCTCATGAGACTGAATAGTT
ATTCTTGAAGGTTGATGCTACTATCTTCTAAAAGTTGATGGTGCTTGCATAGAACAAAAACAAGGAAAGAGTTATTGCTGTCAACACTCATGGTCAACAT
GTTCTCTATTAGGCTGAAGTGTATCAGCACTAGAGCTTTTGTTTGCATTTTCTTGGACAAGGGACTCCAATAGGTGCTACTGGGCACCGTGCGCCACTAC
TTTGCTGAGTTGCCTCTCTCTGACATTGACACTCGCACTTATACATCTTTGGGGCTCTGTATGAGGAGTTAACTAGAAAAGTTGTCACTTTGGTGGCAGA
GAATGAAAACCTAAAGAGGGAGAAAGAATTGGCTTTGAAAGAGTATGAGTCTTTGGAGACTACAAATAAGAACTTGAAGACACAGATAGCCAAGTCAATA
AACACTGAAGTGGAGAAAACTCCTGTTGAGCCTGTGTCATCTGTGGCTGAGATAACACCTTCATCCGGTAATGGTCCATGGTTCCTTTATAACCTTTTTC
CAGTTCCACAAATATTTTGGCCTTCCATCCTTCAATCTTCTAATCCAATTCATCTACAAAATACATCATTTAATTCCATCGCCATTCCACCTAATGCTAA
TGTTTCATGTTCTTCTGAGTCTGAATCACATCACAAGCAAAATAACCTTATAAATGATAATCGAACTCGAGTAATCACTTTTTAAAATTTTATTTTGATC
TATCCTTTTGATTTTTGAGGTTGTAAGTTTCTTTCTTTAGCTTAATCACTAGAAGAAGATAAGAAAGCTTTTGAAATGACTGAGTCAAAAGAGGCAACAT
TGCTTGAAGCAGAGAAGATTTCCTGTCGTAAATCTGAAGTGGATTTCAAGTTCCTGTGTTTTTTGCTGGTTTCTCAAGTCAAGAATTGGGAAGTAACACA
TTCCTGTTTTTGGGATTTATTGTTCTTTATTATTATTATTATTATTATTATTAAGTCATGTTTTAGGAAATTGGACGATCTGATGGTGCAACTTCTCCAG
CAGTTGAGGCTTTAACCTTCTCTCATACTTACTGTTTGCTGCTAGCTTTAATTCAATTTAGTTGTC