Detailed information on CNT0002061


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q96319|ERH_ARATH, E-value = 8e-13

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs
: nothing found

Most similar lncRNAs
:
CNT0006891, E-value = 1e-07 (V. vinifera)
CNT0043554, E-value = 7e-09 (A. thaliana)
CNT0033726, E-value = 3e-08 (P. patens)
CNT0023427, E-value = 7e-09 (A. trichopoda)
CNT0032384, E-value = 3e-08 (O. sativa)
CNT0011121, E-value = 4e-07 (S. tuberosum)
CNT0039778, E-value = 1e-07 (S. moellendorffii)

Expression of CNT0002061

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MFFCVYVFAVTVTTMAVWFLLAVMIIQVMLTCHMIDSGLSNEHFNI*

>peptide 2 (37 aa)
MILVGKETIIEKGKVAGEESTWQYWSGCWGIGAWYLA*

>peptide 3 (55 aa)
MANRHTIILMQASPNRATRTFMDFESITQAMGGIYLSLLNFFAIFFFKMNSKTCV*

>peptide 4 (50 aa)
MILRLYRKKGKIEKVREYTDCFVHFTILVKVLLLSSKLLISPSFDPELEA*

>peptide 5 (29 aa)
MDMNRWLTYTGDFVTLCHCQWFYMDHLLD*

>peptide 6 (38 aa)
MITIQPLCQVKVLPYSLFVRGCMHEGVCHCGKPEKKWI*

>peptide 7 (63 aa)
MTGPNAQRFKICKFSFVGNHWSKRKCLLALQIWLHVVYTFLLAGNKHQLKFLDIMYINIKLQC*

>peptide 8 (37 aa)
MTIVLALELDKWKICLLNCTQLHLWLPQVTFKTNLDS*

Sequence

>CNT0002061
GGGTCCTATAATTAAACTCCAAAATGTAATAGCTTATGATTTTGGTAGGAAAAGAAACTATTATTGAAAAAGGAAAAGTAGCAGGTGAAGAGTCCACGTG
GCAGTACTGGAGTGGGTGTTGGGGAATTGGAGCGTGGTACCTTGCGTAGTTGCGACGAAGGGAGTTGATCAAAATCGTAATCCTCACTCTCACTCAGTTC
TTGTTGCGATCTTCTTGCTTTGCTTCCGTAACTAACCAACATGGCAAATCGCCACACAATTATTCTGATGCAGGCCTCTCCGAACCGAGCAACTAGGACA
TTTATGGATTTTGAATCAATTACTCAGGCCATGGGTGGTATATACCTTAGCTTGCTCAATTTTTTTGCAATTTTTTTTTTCAAAATGAACTCCAAAACAT
GCGTATAAGACTTGAAGTATAAATACTTTGTGCAACCTTACTTGCTACTCAGTTTTTTTTTTTATTGGTAAATATTAATTGTTAATTTTTGTTAGCAGGA
AGAATAGAATTGGTGATTTTTCTTTCCTTTTCTTATATCTTAACTATCCAACCAACCTTATTTGCTATTTTACCTTAAGCCTAAGAAAATAATTGATTAT
TTCTCAGAGAATCTAATCCAAACACATGACAGGTCCAAATGCTCAACGTTTTAAAATTTGTAAATTCTCTTTTGTTGGAAATCACTGGTCCAAACGAAAG
TGCTTACTAGCCTTGCAAATTTGGCTTCATGTAGTGTACACATTCTTGTTAGCAGGAAATAAGCACCAATTGAAGTTTCTTGACATAATGTACATCAATA
TAAAATTACAATGTTAGATTGGAGAAGGAACACGGTCCTGGTAATCTGAATAATTATGATTAAAATGCATTGAAAATAGAGGATAACACACTAATAGTGG
AGAGCAAAATTCTGCAGATTAGTAGTTCATAAGCTGATATAAACCATCAAACAGCAGTTGAACTGTTGGAAGTAGTCGTATTAGCAAGAAGCTGAATCCA
CATCTCAAACCTGTGACTGTGACATCTGGGTCTCATGTTGTTAACAATTCAATATGTTAAGGCAGTTGAAGTAGTTATATTAAAAAGAGGCTGATTCCAC
AACTCAAACTGGGTCTCATGATAACAATTCAACCATTATGTCAAGTCAAGGTATTGCCGTATAGCTTGTTTGTGCGTGGGTGCATGCATGAAGGGGTATG
CCACTGTGGCAAACCTGAAAAAAAATGGATATGAATAGATGGTTGACTTATACTGGTGATTTTGTTACTCTTTGTCATTGCCAATGGTTTTACATGGATC
ACTTGTTAGATTAGTAGAAACTTCAATCTTGTGTTTATGCAGGCATATGTGCATTGTATGAAAGGAAATTGAAAGAGTTAAATCCGGCCATCAGAAATCT
CTCTTATGATATTGTGGATCTCTACAACTTCATAGATGGTCTTGCTGACATGAGTGCTCTAGTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAAGTCA
TGATTCTTGAGCAATAACCATGCATTATACCCTGACAGATTAGTTAGTACTTATCTGTATTTATGATTTTGAGACTTTATAGAAAAAAAGGAAAAATAGA
AAAAGTGAGAGAATATACCGATTGCTTTGTACATTTTACAATTCTAGTCAAGGTTTTACTGCTCAGTAGTAAATTGCTCATTTCACCTAGCTTTGATCCT
GAGCTAGAAGCTTAATCTGTTAAAGGTTGTGTTCCTTGTGACATTCAGATTGAAATGCATGAGTTCTAAGAAAAGTAAAATGAATTATGATTGAAGAGCT
TAGTAATCTCCTCCACCCCCTCCCCTCTCCCCTCTTCTCTTATAATACCTAAACTCAAGTATATGTTTTTTTGTGTCTATGTGTTTGCCGTGACAGTGAC
TACCATGGCTGTTTGGTTTCTACTTGCAGTTATGATCATTCAAGTCATGCTTACGTGCCACATGATCGACAGTGGATTAAGCAACGAACATTTCAACATT
TGAAGAAACTGGCACGTTGATTGAGATGTGGTATCCTTCAATAATCCAATTGCAAGCGATTTATTGTAAAGATAATCAATAAGTGTAGAACATGTTTATA
TGATGTTATTATGCGGGATATGCTCTAGTCTCTATGTTTTTTTAGCATGACAATTGTACTTGCTCTTGAATTGGACAAATGGAAGATATGCCTTCTAAAT
TGTACTCAGTTACATCTATGGCTGCCACAAGTTACTTTCAAAACCAATCTTGATTCTTGAACTTAAA