Detailed information on CNT0022093


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q9FF10|HPSE1_ARATH, E-value = 0.0

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs
: nothing found

Most similar lncRNAs
:
CNT0000532, E-value = 7e-09 (G. max)
CNT0011077, E-value = 1e-13 (S. tuberosum)

Expression of CNT0022093

ERR364329: 32.455 RPKM

Peptides detected in this lncRNA

>peptide 1 (31 aa)
EAQRWLFFGERELHGSFSSFLVGVVSQILLF*

>peptide 2 (77 aa)
GPKVALFRRERAAWVFLIFSCRSSVPNLALLERERREERERSIDLEIHTSLGGSQSVIGSEVWKSPSLMGQSFCFET*

>peptide 3 (38 aa)
MQLESAMYLCNLCESAIYLCNLFLGLFVWALRGQASKV*

>peptide 4 (524 aa)
MFVNVETGITVKGDSVIAKNGDNFICATLDWWPETKCNYDQCPWGQASVLNLDLNNSLLAKAIKAFNPLRIRIGGSLQDQVLYDVGDLKSPCLPFERKSD
GLFGFSSGCLSMDRWDELNEFLSRTGAIITFGLNALYGRHHSSTNVWYGPWDSSNARDLMKYTIAKGYQVDSWEFGNELSGPGVSARVSAKQYGQDLINL
KALIDQLYENSSSRPLVIAPGGFFYPNWFTELLHTSGPGVLNVITHHIYNLGPGSDPNLVNKILNPAHLSQISQTFRDVWLTIKNSGPWATPWVGEAGGA
YNSGGRDVSDTFVNSFWYLDQLGMSSIYHTKAYCRQSLIGGNYGLLDRPTFEPNPDYYSALLWHRLMGKGVLAAKFDGSPYLRTYAHCSKSTMGVTLLLI
NMSNSTRFNIMVENEVNDDIRLEVKTDKGDRSFVDRVKKSFSWIGKRASDEQLHRQEYHLTPKDGYLKSRTMLLNGNPLELTDYGDIPNLDRVLVDAELP
ISIAPLSIAFVNMPHFEAEACSDH*

>peptide 5 (46 aa)
MLKRELQLREIRLLLKMAIISSVQLWIGGRKLNVTMINVLGDKPLF*

>peptide 6 (93 aa)
MGTLKAELCFLMGILWSSQTMETYPTWIVFLLMRSYQFLLLLYLLPLSTCHILRQKLVLITNQSSVPINLETTYSLPSPPPKGKKAYDCFGDL*

>peptide 7 (57 aa)
MPNCIINVFGLKYQIDFECIIQCNSTFKFIASISLSLSRRNLGWLERRTKVVSNNAA*

Sequence

>CNT0022093
GAGGCCCAAAGGTGGCTCTTTTTCGGAGAGAGAGAGCTGCATGGGTCTTTCTCATCTTTTCTTGTAGGAGTAGTGTCCCAAATCTTGCTCTTTTAGAGAG
AGAGAGGAGAGAGGAGAGAGAGAGGTCTATTGATTTGGAGATCCATACCTCACTTGGTGGGAGCCAGTCTGTTATTGGCTCTGAAGTCTGGAAAAGTCCG
AGTCTTATGGGCCAAAGTTTTTGTTTTGAGACTTAAACCATTTGAGGTTCCAGACCCAATATCTGAGTTCTGGGTTTTCTATATTCTTAGCTGAAATTCA
GCTGGTTTTCCCAGTTTTATCAATGTTTGTTAATGTTGAAACGGGAATTACAGTTAAGGGAGATTCGGTTATTGCTAAAAATGGCGATAATTTCATCTGT
GCAACTCTGGATTGGTGGCCGGAAACTAAATGTAACTATGATCAATGTCCTTGGGGACAAGCCTCTGTTCTGAATCTGGACCTGAATAATTCTCTTCTTG
CCAAGGCCATCAAAGCTTTTAATCCTCTGAGGATTAGGATTGGAGGGTCTTTGCAAGATCAAGTTCTGTATGATGTGGGAGATTTGAAATCTCCATGCCT
CCCATTTGAAAGGAAGTCAGATGGCTTGTTTGGTTTCTCTAGTGGTTGTCTGTCCATGGATAGATGGGATGAACTCAACGAATTCTTAAGTAGGACTGGA
GCAATTATAACTTTTGGCCTGAATGCGCTCTATGGAAGGCATCATAGTTCAACGAATGTGTGGTATGGCCCTTGGGACTCCTCGAATGCTCGTGATCTCA
TGAAATACACCATTGCCAAAGGCTACCAAGTCGACTCTTGGGAATTCGGAAATGAGTTGAGTGGACCTGGTGTTTCTGCGCGCGTGAGTGCAAAGCAGTA
TGGACAAGACTTGATCAACCTCAAAGCTCTAATCGATCAATTATATGAGAATTCATCGTCTAGACCATTAGTAATAGCACCAGGAGGTTTCTTCTATCCT
AATTGGTTTACAGAACTTCTCCATACGTCAGGTCCAGGAGTCCTGAATGTCATTACTCACCATATATATAATCTCGGTCCAGGTAGCGACCCCAATCTAG
TGAACAAGATATTGAATCCAGCACACCTGAGCCAAATATCTCAGACATTTAGAGATGTTTGGCTCACTATAAAAAACTCTGGCCCTTGGGCAACACCTTG
GGTTGGTGAAGCAGGCGGTGCTTACAACAGTGGTGGTCGAGATGTCTCTGACACCTTTGTGAACAGTTTCTGGTACTTAGATCAGCTAGGAATGTCATCT
ATATACCATACAAAGGCTTACTGCAGGCAAAGTTTGATTGGTGGAAACTATGGTCTCCTAGACAGACCAACTTTTGAACCGAATCCTGACTACTATAGCG
CATTGTTGTGGCATCGACTGATGGGAAAAGGAGTGCTCGCTGCTAAATTTGATGGTTCACCGTACTTACGAACATATGCCCACTGTTCTAAATCGACAAT
GGGGGTTACACTTCTCTTGATCAATATGAGCAATTCTACAAGATTCAATATCATGGTAGAGAATGAAGTGAACGATGATATAAGATTGGAAGTCAAGACA
GATAAAGGAGATCGATCTTTTGTGGATAGAGTCAAGAAAAGCTTTTCATGGATCGGGAAGAGAGCTTCAGATGAGCAACTACATAGGCAAGAGTACCATT
TAACACCAAAAGATGGGTACCTTAAAAGCAGAACTATGCTTCTTAATGGGAATCCTTTGGAGCTCACAGACTATGGAGACATACCCAACTTGGATCGTGT
TCTTGTTGATGCGGAGTTACCAATTTCTATTGCTCCTTTATCTATTGCCTTTGTCAACATGCCACATTTTGAGGCAGAAGCTTGTTCTGATCACTAATCA
GTCCAGTGTTCCCATAAACTTGGAAACAACCTACTCTCTCCCTTCCCCACCCCCCAAAGGAAAAAAAGCATACGACTGCTTTGGAGATTTATGATAAGTA
ATGCCCAATTGTATAATCAATGTATTCGGGTTGAAGTATCAAATTGATTTTGAGTGCATTATACAATGTAATTCCACGTTCAAATTTATAGCCAGTATCT
CTCTCTCTCTCTCTCGCCGAAACTTAGGATGGCTTGAGAGACGTACTAAGGTTGTTAGCAATAATGCAGCTTGAATCGGCAATGTATTTATGCAATCTTT
GTGAATCGGCAATTTATTTATGCAATCTTTTTTTGGGGCTATTTGTATGGGCTCTACGGGGACAAGCTTCAAAGGTTTGAACC