Detailed information on CNT0022403


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs
: nothing found

Most similar lncRNAs
:
CNT0000479, E-value = 2e-13 (G. max)
CNT0011386, E-value = 9e-07 (S. tuberosum)

Expression of CNT0022403

ERR364329: 46.39 RPKM

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MVPAKWWFNKHGWHLPMTLLFGNDGLTNVIGT*

>peptide 2 (45 aa)
LSTSFSLYALATRLVISPSFAVITSPLRISPTQRAFPRRNNGPPQ*

>peptide 3 (42 aa)
MLVAASFTSWIHHIVACMGAEVALDVVLSPLQLLRWMSLQRD*

>peptide 4 (79 aa)
MLHTTVYWGLISLFLSPSLSLKWWISWWMCGSKRACTINFPYQTLSICVTTATKTNTIILFLRNKCPIFLPTTIPTSKH*

>peptide 5 (30 aa)
MHPDSILISLPNSVIALRFRFSEGIRSCMI*

>peptide 6 (189 aa)
MIGHLRQTLLLLHLNACCCLLHVLDPSYCCMYGSRGCFGCCTKPSPIIAVDEPSKGLRIQGRTVKKPSLSEDFWSTSPYEMDNSGVQSQRSISSISTSNQ
NPDPHSGQCSTGPTEFVNHGFLLWNQIRQEWVGNRPAENRTPQVREPRLSWNATYDSLLGTNKPFPQPIPLSEMVDFLVDVWEQEGMYD*

Sequence

>CNT0022403
CTCTCCACTAGTTTCTCTCTCTACGCTCTCGCCACTAGGCTTGTTATCTCTCCCTCTTTTGCAGTTATAACCAGCCCGCTTCGAATTTCCCCTACCCAGA
GAGCCTTTCCGCGAAGGAACAATGGACCCCCTCAGTGATATGATCGCGAGGCTGTTCTTCCTTCGTGGACTGATGATGAAGCTTTTGAGGAGGGGATCTG
CTCTTTGATGATTGGTCATTTACGGCAAACTCTGCTTCTTCTTCATTTAAATGCTTGTTGCTGCCTCCTTCACGTCTTGGATCCATCATATTGTTGCATG
TATGGGAGCAGAGGTTGCTTTGGATGTTGTACTAAGCCCTCTCCAATTATTGCGGTGGATGAGCCTTCAAAGGGACTAAGAATTCAGGGAAGGACTGTAA
AGAAACCCAGTTTGTCTGAGGATTTTTGGAGCACAAGCCCTTATGAGATGGATAATAGTGGAGTCCAGTCACAAAGAAGCATTTCGTCAATAAGCACTTC
AAACCAAAATCCTGATCCTCACAGTGGACAATGCAGCACAGGCCCCACTGAATTTGTTAACCACGGTTTCCTTCTGTGGAACCAGATTAGGCAGGAGTGG
GTTGGGAACAGGCCAGCTGAAAATCGTACCCCACAGGTGCGAGAACCAAGGCTAAGCTGGAATGCTACATACGACAGTTTATTGGGGACTAATAAGCCTT
TTCCTCAGCCCATCCCTCTCTCTGAAATGGTGGATTTCCTGGTGGATGTGTGGGAGCAAGAGGGCATGTACGATTAACTTCCCATACCAAACACTCTCCA
TTTGTGTAACAACAGCAACAAAAACAAACACTATTATTCTATTCTTGAGGAACAAATGCCCTATCTTTCTTCCTACTACTATTCCAACAAGCAAGCATTG
ATAGTTGACATGAATGAATGAAGGCTTGTTATAACCCAACAAAACTCTTGTATTGTAATGTAATACATGATATCTTCAACAGCTACAAGAGAGGGGGATA
ACAGTTTTATTTGCTCAATTGCCATGCAAAGAAGAATATTGGGTTGTTAGTTACATGGGTTTTTGTTTTAGATGCACCCTGATAGCATTTTGATATCCCT
TCCTAATAGTGTGATAGCACTTCGATTTCGTTTTTCGGAAGGCATACGAAGCTGTATGATTTAGCGAAATGATGGTTTAACAAACATGGTACCAGCGAAA
TGGTGGTTTAACAAACACGGTTGGCACCTGCCTATGACATTACTTTTTGGAAATGATGGTTTAACAAATGTGATTGGCACTTGAC