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Detailed information on CNT0022663


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0007372, E-value = 6e-10 (V. vinifera)
CNT0034328, E-value = 6e-10 (P. patens)
CNT0012080, E-value = 6e-10 (S. tuberosum)

Expression of CNT0022663

ERR364329: 13.044 RPKM

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MQKTTIILQENLSLSLSIYIYISFFFFGTYTDSETQVWLCSFSLLL

>peptide 2 (35 aa)
MITWIAMIFRFPPIGRRWVKFSWMRLSLSTDLNMV*

>peptide 3 (33 aa)
MTMGMLINMGQKHYATGSGMKPWLTLTMACFVV*

>peptide 4 (122 aa)
EDAPSSEELKEVRRLTTLAFRDCVPYQRSSFVALQSRTGVEVCTFCLIMKNASSLLDNRDLLKLETEATLADLVRLFVSLDDNLDSNDLQVPSNRQKVGE
VLMDAIVALNRFEHGVKDCLGI*

Sequence

>CNT0022663
AGAGGATGCCCCATCCTCAGAGGAGTTAAAAGAGGTTCGGAGGCTCACGACCCTTGCTTTTAGGGATTGTGTCCCTTATCAAAGAAGCTCCTTTGTTGCC
CTCCAGTCAAGAACCGGAGTTGAGGTTTGTACATTTTGTTTGATTATGAAGAATGCATCTTCATTACTCGATAACAGAGATCTGTTGAAATTGGAAACTG
AAGCTACACTTGCTGATCTTGTAAGATTGTTTGTCTCGCTGGATGATAACTTGGATAGCAATGATCTTCAGGTTCCCTCCAATAGGCAGAAGGTGGGTGA
AGTTCTCATGGATGCGATTGTCGCTCTCAACAGATTTGAACATGGTGTGAAAGATTGCCTGGGTATCTGAGGAGTGCTGCAAAAGAAGGTTGTGGCCTTG
TGCAAAGAAAGGGAAGAGAACATCCAATGTTTGTTCATTTGCATGACAATGGGTATGCTCATTAACATGGGCCAGAAACACTATGCTACAGGATCAGGCA
TGAAGCCTTGGCTCACTCTCACAATGGCCTGCTTCGTGGTCTGATATAGGTTGATGATGCACTTGTGTGGTCTCGTGTATGTAGGTGGAGAGGATTGGGT
ATACGAAATGTCAGATGTGAGTGCCGTATCCTTGTATTGACACATGCAAAAGACAACTATTATTCTGCAGGAAAATCTCTCTCTCTCTCTCTCTATATAT
ATATATATCTCCTTTTTCTTCTTTGGAACATATACTGATTCTGAAACTCAAGTTTGGCTTTGCTCCTTCAGCTTGCTCTTGAC