Detailed information on CNT0002307


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs
: nothing found

Most similar lncRNAs
:
CNT0007372, E-value = 1e-08 (V. vinifera)
CNT0034328, E-value = 2e-07 (P. patens)

Expression of CNT0002307

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MYVGSPQVNVFSWINMEEFVCAWMKLYGRDIWKIQKKIESKDWSG*

>peptide 2 (65 aa)
MSEVIFVITSAVKDVCGKPPSERLFLDKYGRICLCLDEIVWKGYLENTEKDRIKRLVRLKPPTEF*

>peptide 3 (35 aa)
MILAVLFANVEGNILIERFVSCPKLITQLRGKLEN*

>peptide 4 (34 aa)
MTEAASLQALIRSPAVFMEFLQRSVYTGVLSWLN*

>peptide 5 (36 aa)
MNPFFCSYDDTPSLSLYIYMYIYFPQLLTIVTQFDL*

Sequence

>CNT0002307
GTCAATTAATTGAAGTTGAACACGCAAAGTCGAGTAGGAGAGAATCAGTTTGGTTTTGAAGAAGGGAGGAGACGAGACAATGATACTGGCTGTTCTGTTT
GCCAACGTTGAGGGCAATATCCTCATCGAACGTTTCGTTTCGTGCCCAAAATTAATAACTCAACTACGTGGGAAACTAGAAAACTGATACGGTCCTAAGC
TAAAGAGAAGGGAAAGAGAAGAAGATAAGTCTGAGAGATAAGCTTTTTCTGATATCCTTTATTTCCCTTTCATATTACATTTATAGTTTTTCAGTTAACA
GAATCTAACTGAATCCTAACTAACTAGGTACTATAACGGATTCTGGAATTCTGGAAGGTTCTTCAAGTCAAACGCGAGTCAATGACTGAGGCCGCGAGCC
TGCAAGCACTTATACGAAGTCCCGCAGTTTTCATGGAGTTCCTGCAGAGGAGCGTCTACACTGGCGTTCTTTCTTGGTTAAACTAGGAGCTGACAATCTT
AAGGGTGTAAAAAATGAAGAACTCCTAGTTGCTTGCCATAATGTCAGAAGTGATCTTTGTGATAACCTCAGCTGTGAAGGATGTATGTGGGAAGCCCCCA
AGTGAACGTCTTTTCCTGGATAAATATGGAAGAATTTGTTTGTGCTTGGATGAAATTGTATGGAAGGGATATTTGGAAAATACAGAAAAAGATAGAATCA
AAAGATTGGTCAGGTTAAAGCCTCCAACTGAGTTCTAAATGAGAAGTTCAAAAGTACTCATTATACAACTTGCAGTCTGTGTTAGTTGTTCAGCATCTTG
CAACTGGGAGTGGCAAGGCACTTAAGTTTATTTCCAACAATTGTCGGTCAGGCAAACCTCTACATATGAGCTTTCTTCCTTAGTGTAGCGAGGCAAGGAT
TTTGCTGGGCCAACATTTGTATTACCCTTCTTAATTTTTAACATTTTTTTTCTGCCATCAAATTTTTATTTTATTCTATCTTGTGCATTGTGCTTTTGTT
GGATTTGGATGAATCCTTTTTTTTGTTCCTACGATGATACTCCCTCTCTCTCTCTATATATATATATGTATATATACTTTCCTCAACTGTTAACAATTGT
TACTCAATTTGATCTGTAATGCATATTAATGTTAGAGACTAAATTAACTTATTTACATCAATCTCGGA