« Back to Glycine max search


Detailed information on CNT0002309


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|F4IKF6|SPNS3_ARATH, E-value = 1e-14

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0008022, E-value = 7e-10 (S. tuberosum)

Expression of CNT0002309

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MCTSMYLLLVNGDYLARVYFSFMLHHLVLNVF

>peptide 2 (79 aa)
MAMSAVAIHIFVDVPSSPLVGVLQEYFCIVWIDLMKTVNIKYQTLKGQTPCRCFKRRLEKHQHLLLNPNNEFLLMPDQT*

>peptide 3 (96 aa)
MFACNFLFGSCELCMFTLCYTKFEASIYGYVCCCYSYICRCTFLASCWSSPGIFLHSVDRFDEDSEHQVSNVERSNTMPLLQEKTGETSASPAQSQ*

>peptide 4 (31 aa)
MLVSGDNAFCSFFSVSISMQSISLILYINLS*

Sequence

>CNT0002309
GCTTATCATCTATGAATATTTTAGCAACTCTGATATTGTCAAGTTAAATTCTTGATTAATGATTATGTTTCTAAGTAAAATCACTTCTATGTTTGGGAAA
TTAGATGAAAATTTGCTCTCTGAGAACTAAGTCATCCTAGGGTTGGTTTGTCTTTTGAATTTTATGCTTGTTTCAGGGGACAATGCTTTTTGTTCTTTTT
TTTCCGTATCTATTAGCATGCAGAGTATATCCCTGATTCTTTATATCAATTTGTCTTAATAATTTTATCATGAAACTTGAAAGATAATCATTTAATGGTA
GTATGGTACTAGTAACTAGTAACTACTGAGTTTGTACAGCAAGCGTGGATTAGAAAATTCCGGACTTCTCCATTTTCTACATGAGATGAGATGGAATGTG
ATCATTAGAACTAATCTAAATTGTTGTTCCTTGGAAACCATTTCTGTAACCTGATCGGAAGTTGAAAGTTTTGCACTAAATGTTTGCTTGCAATTTTCTT
TTCGGGTCCTGTGAATTATGTATGTTTACGTTGTGTTATACCAAGTTTGAGGCCTCTATCTATGGCTATGTCTGCTGTTGCTATTCATATATTTGTAGAT
GTACCTTCCTCGCCTCTTGTTGGAGTTCTCCAGGAATATTTTTGCATAGTGTGGATAGATTTGATGAAGACAGTGAACATCAAGTATCAAACGTTGAAAG
GTCAAACACCATGCCGTTGCTTCAAGAGAAGACTGGAGAAACATCAGCATCTCCTGCTCAATCCCAATAATGAGTTTCTTTTAATGCCTGACCAAACATA
GTATTTCAGTGATAACCACTATGATGTAAATAACTTTTTTTTGTACATCCAATGTGTACAAGTATGTATTTGCTTTTGGTTAATGGAGATTATTTAGCAA
GAGTATATTTCAGTTTTATGCTTCATCATCTTGTGCTTAACGTATTTG