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Detailed information on CNT0023291


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0000227, E-value = 8e-06 (G. max)
CNT0029093, E-value = 2e-06 (O. sativa)
CNT0011121, E-value = 8e-06 (S. tuberosum)

Expression of CNT0023291

ERR364329: 2.691 RPKM

Peptides detected in this lncRNA

>peptide 1 (51 aa)
MGINSIQWSSKIPGWMDGDGTCIIQYAMEEVKFCTGDVDTLDAKCCTSNSM*

>peptide 2 (42 aa)
AFSHMGRTLFVSIPSIDSILFYSMGFYYNKEEARFSVVHQSE*

>peptide 3 (41 aa)
MCLCSLPTQTAQKDLYTKSCPYHTIPSLSLSLSLCQLSSFK*

>peptide 4 (64 aa)
PFHIWEGRCSSQFPLLILFYSIQWGSTTIKKKHAFPWCTSRNNKKQKRKKLSSRLPWFLTSETG*

Sequence

>CNT0023291
GCCTTTTCACATATGGGAAGGACGTTGTTCGTCTCAATTCCCTCTATTGATTCTATTCTATTCTATTCAATGGGGTTCTACTACAATAAAGAAGAAGCAC
GCTTTTCCGTGGTGCACCAGTCGGAATAACAAAAAACAAAAGAGGAAGAAGCTCTCATCAAGACTGCCATGGTTTTTGACCTCTGAGACGGGATGAAGCA
TCCAAAGGGATCGCATTGATCCGTCATGAGAGAGAGAGAGACCAGTACAGAGTTTTAGAGAGAGAAAGGGAGATACCAGTTTAGAGAGTGAGAGTCGAAA
GATTGATGGATCATGCGATCCCTTTGGATACCTCCTCCTCTGGCTCCACTCTTTTATCATCTTCGAACTTTCTGCTTTTACTTTGAATTGTGAAAGACAT
ATATATGCAGGGAAGCAATTGAGGAAAAATGTGTCTCTGTTCTCTACCCACCCAAACTGCCCAAAAAGATCTCTATACCAAAAGCTGCCCCTACCATACC
ATACCTTCTCTCTCTCTCTCTCTCTCTCTGTGCCAGTTATCCTCATTTAAGTAGTTAGGGGCGCATGTGATGGGCATAAATTCTATTCAGTGGTCCTCAA
AAATTCCAGGATGGATGGATGGTGATGGCACTTGCATCATCCAATATGCAATGGAAGAAGTGAAGTTTTGCACGGGAGATGTGGACACTTTAGATGCCAA
GTGCTGCACTTCCAATTCTATGTGACCCTTCCTAATCTGCCACATAATCTTTTAGCACT