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Detailed information on CNT0002397


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q9SR70|FK164_ARATH, E-value = 2e-15

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0034328, E-value = 6e-06 (P. patens)
CNT0023676, E-value = 2e-06 (A. trichopoda)
CNT0031808, E-value = 2e-06 (O. sativa)

Expression of CNT0002397

Peptides detected in this lncRNA

>peptide 1 (117 aa)
MKLSVFHHQHHPMILNCPLTLTRTHKRLNNKGSYRWLPCHCSHSSTNKIAAEPVTVSLSIEGRRALLSCLLTTVVGVYACDVAGAVSTSRRALRGAKIPE
SDYTTLPNGLKCVLLVGG

>peptide 2 (46 aa)
DVKQVKTCDFLNASKLWMESTTLSSQYFSLSLSLSSVTKSKNKKRS*

Sequence

>CNT0002397
GATGTAAAGCAAGTCAAAACCTGTGATTTTCTGAATGCTTCAAAATTGTGGATGGAATCAACCACGTTATCCTCTCAATATTTCTCTCTCTCTCTCTCTC
TCTCCTCTGTAACCAAATCAAAAAATAAAAAAAGGAGCTAACTAAACATAATTCTGATATCGCAGTAAAGTATCAACCAAACCAACAATCCAACACCATG
AAACTCTCTGTTTTCCACCATCAGCACCATCCTATGATTCTCAATTGCCCCCTTACCTTGACAAGAACACACAAAAGACTTAACAACAAAGGTTCATATA
GGTGGTTACCATGCCACTGCTCACATTCTTCCACAAATAAAATTGCTGCTGAACCAGTTACGGTGTCTTTAAGTATTGAAGGAAGGAGAGCATTACTCAG
TTGTCTCCTCACAACTGTTGTTGGAGTCTATGCATGTGATGTGGCTGGAGCTGTTAGCACAAGTAGAAGAGCTCTAAGGGGAGCCAAAATTCCTGAAAGT
GATTATACAACCTTGCCCAATGGTTTGAAATGTGTATTGCTAGTTGGAGGC