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Detailed information on CNT0024114


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0005713, E-value = 2e-11 (V. vinifera)
CNT0042889, E-value = 2e-11 (A. thaliana)
CNT0034678, E-value = 5e-12 (P. patens)
CNT0017680, E-value = 3e-07 (Z. mays)
CNT0002061, E-value = 2e-08 (G. max)
CNT0024260, E-value = 2e-14 (O. sativa)
CNT0012080, E-value = 2e-08 (S. tuberosum)
CNT0038582, E-value = 8e-11 (S. moellendorffii)

Expression of CNT0024114

ERR364329: 11.968 RPKM

Peptides detected in this lncRNA

>peptide 1 (37 aa)
LLVPILFYVDSRGERNSIVACGPCAFAGFRQCKVVKL*

>peptide 2 (49 aa)
MEPPPSQGFSGYEAKDYKVEDEEDRVTNYCCSCCYDCMDNCLGYCCGSY*

Sequence

>CNT0024114
TGCTTCTTGTCCCAATTTTATTTTATGTTGATTCAAGAGGTGAGAGAAACTCCATTGTAGCCTGTGGCCCTTGTGCCTTTGCAGGTTTTCGGCAGTGTAA
AGTAGTAAAGCTTTAGAGATGGAACCACCTCCTTCTCAAGGGTTTTCAGGTTATGAAGCCAAGGATTACAAGGTAGAAGATGAAGAAGACAGGGTAACGA
ATTATTGCTGCTCCTGCTGCTACGACTGTATGGATAACTGCCTCGGATATTGCTGTGGTTCTTATTAAAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTAAATATGCTAAAACTCAAGAAATCCTTTGGGCTGGCTATATGGTATGACTTATTTCATGACTAATTATAACTAGTGAATGCCTTTTTATTTTTTCT
TTTCATCTTATCTCTTTCCATGTACTAATGCTATTTTCATTTTATAGAGA