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Detailed information on CNT0024794


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|P0C473|RR16_ORYSA, E-value = 2e-48

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0040393, E-value = 1e-18 ()
CNT0017270, E-value = 4e-126 ()
CNT0002248, E-value = 4e-58 (G. max)
CNT0021643, E-value = 7e-60 (A. trichopoda)
CNT0016675, E-value = 1e-79 (S. tuberosum)

Expression of CNT0024794

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MKRKFFGSYRILVFLRLEYQKKEKNEVKKMHFL*

>peptide 2 (36 aa)
MKYSSKKGNKQVCLRLIYYGISILNRGLEMINPILK*

Sequence

>CNT0024794
GGCAAATTATTTCTAAATAGTTAGACAACAAGGGATACTAGTGAGCCTCTCCTAGTTTTTTATTCATTTAGTTCTTCAATTAACTCAAAGTTCTTTCTTT
TTCTTTAAAGAATTCCGCCTTCCTTAAAATATCAGAAACTGTTCTTGTAGGTTGAGCACCTTTTTCAAGGAAATAGAGAATAGCTGGAACATTTAAACAA
GTTTGATTCTTTATCGGATCATAAAAACCTACTTTTCGAAGATCTCTTCCTTCTCTTCGAGATCGAACATCAATTGCAACGATTCGATAGACAGCTTGTT
GCTTTCTACCACATCGTTTTAAACGAAGTTTTAACATAACATTCCTCTAATTTCATTGCAAAGTGTTATAGGGAATTGATCCAATATGGATGGAATCATG
AATAGTCATTAGTTTCGTTTTTTGTATACTAATTCAAACTTGCTTTGCTATCTATGGAGAAATATGAATAAAAGAAATTAAGTATTTATCGGGAAAGACT
CCGCAAAGAGCCAATTTATTTAAACCCATATTCTATCATATGAATGAAATATAGTTCGAAAAAAGGGAATAAACAAGTTTGCTTAAGACTTATTTATTAT
GGAATTTCCATCCTCAACAGAGGACTCGAGATGATCAATCCAATCCTGAAATGATAAGAGAAGAATTGACTCTTCTCCAACAAATAAACTATCAACCTCC
CGTTTAATTAATTTAATTAATATATTAGATTAGCAATCTATTTTTCCATACCATTTTTCCGTAACAAAACTAATTAACTATTAACTAGTTAAACTATTGC
AATGAAAAGAAAGTTTTTTGGTAGTTATAGAATTCTCGTATTTCTTCGACTTGAATACCAAAAGAAAGAAAAAAATGAAGTAAAAAAAATGCATTTCCTG
TAAAGTAAAATTAAGGTCTTTGCTTTTACTTATTTTTTCTTTTACCTAAAAGAAGCAACTCCAAATCAAAATTGAATCCATTCTATCTAACGAGCAGTTC
TTATCTTATCTTTACCGGGATGGATCATCTGGATATTTAAAAAATCGCGGATCGAGATCGTTTTCGCTTAACCAAAGAAAGAAAAAGAAGAAGGAACCTT
TTTTACTAATAAAATACTATAAAAAAAATTTATCTCTATCATAAATCTATCTCTACCATAAAGGAATAGGTCTCGTTTTTTATACAATGTTCTACGTCAA
GTTTAAAATTTTTTCATGAAAAAAAGATTTTCAATTTGACTGGACTTGACACTGGATTATGTTTTCTGAGACAGAAAATGAACGCATTAGGAC