Detailed information on CNT0025688


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q01148|NU1M_WHEAT, E-value = 9e-45

BLAST vs NONCODE (A. thaliana): nothing found

Potentially orthologous lncRNAs
:
CNT0040464 in

Most similar lncRNAs
:
CNT0005398, E-value = 5e-23 (V. vinifera)
CNT0040464, E-value = 3e-52 ()
CNT0000014, E-value = 1e-14 (G. max)

Expression of CNT0025688

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MKGCFALDALYPPHYEGSVVLGSVEACFFSILFLVINTTTYS*

>peptide 2 (29 aa)
MCLEMAVSCLPARGESAPGASLCCVWPVL*

>peptide 3 (88 aa)
MPADQFTMSLSLTLVKEATWIGLGLLRLMRPRSRSLRSIFLIGASICMGNSLLKDPAQCPLPSPAAFRPKGVYNFVFRTLMPDRETAC*

>peptide 4 (57 aa)
MLFTLPTMRALLSWGALKPASFPYFSWSSIRRPILNRTDLIFTTRGISCFCRILPIS*

>peptide 5 (72 aa)
MAKFLLKPSLPLNSALGVNPAASMRKAAQRRLEGLLRKAARAAEGGKTKGVFWSPLRLGVLVGGVCHDETRE*

>peptide 6 (95 aa)
MAERRWQAVIWIRCFTRRRFSSSRKNCMGVVLGGTSRMTVPRNSTVLRAAMVVDSAEPTQRFRPDCRKWVIRFCISMRRNTAPTIPSSKSSAYRA*

>peptide 7 (42 aa)
MQLRGPLVGPDRWWYHTLLKGTVRETLASYGSVLESGPPPFL*

>peptide 8 (36 aa)
MIEARTLSGQVPLIDHNDIVEMLHGPIYIETEKEEP*

>peptide 9 (37 aa)
MSVDGVKTLPDVEFQKPARGSPLFFDPSEGRVAASTRA

>peptide 10 (33 aa)
MKEKGLRIRKTKEAWRADYKTTTTIQAMSDSEA*

>peptide 11 (89 aa)
MFPFFHSQVKGESHASVCGSRSHALISTGAHSRPAALPKPIIISVPRPHCWKGSASKPYVELPPHTAPLGMGVGPAQACAVKVVVHALS*

Sequence

>CNT0025688
CAAATCAGCTCCGCTGATTTTTTTCCGTTGCAGAAAAGAGACCCCTTACCCTTTTTTTAGAAAATGATGAATATGAAGTCCGGGAGGCTGCGGGTACTAT
GGATCCTCTGACTCCCAATCGGGTTACCTTCCCGGGTCTCGCCGGTGTTGCCTGTAGGTCGTGATGTGCCTCGAGATGGCCGTCTCCTGTCTCCCTGCTC
GTGGGGAATCCGCTCCTGGGGCGTCGCTCTGCTGCGTCTGGCCCGTCCTCTAGGCACCTTTGGGGGGCAGGGAGTGTGACAACGTACACGCTTCCCTTTA
CTCCATAGGGCCTTTTCCTCAGTTGCAGGGTTTGGTGGCCCGAAATTGACTTGGCTTCGCCAAAAGGCCCCATCTCCAAAGCCCGGCTCGCGAGGCGTCC
CTCTCGCTGTAGGGCGGAGCCCCCTCGCCTCGCTCTTGTGACATGCTATGTTTCCCTTCTTCCATTCTCAAGTCAAGGGTGAGTCCCATGCGTCAGTTTG
TGGATCGCGGTCTCACGCACTAATCTCTACAGGTGCCCATAGTAGGCCGGCCGCCCTACCTAAACCAATCATCATATCGGTCCCTAGGCCCCATTGCTGG
AAAGGCTCGGCTTCAAAACCGTACGTGGAGCTTCCGCCTCATACGGCTCCTCTAGGGATGGGGGTAGGCCCAGCCCAGGCTTGTGCGGTTAAGGTTGTTG
TACACGCCCTCAGTTGAGCATTCAGTTAGAGACGGCGATCGTAGGTTCGCCGGAGGAGAGGGTGTTGCGAGCAAGATTGCACAAACAAAGCCCTCCTGCC
CGCAGCCCTATTCTAGAAATTTGGCTGGCTACGTTACTTATAACCGCAGAACGAGCAATGAATCCCCAACGACAAACGAACAAGGGGCGGGGCATTTTCG
GGGAGTAGCCCCCTTCAGAAGAAACTTCCTGGCACATACATTAAGGGAGCCATCGAAAGGTGACTGAAACACCTGAAACGGGGACTACCCGAGCTAATGA
TAGAGGCAAGAACACTTTCCGGCCAAGTCCCATTAATTGATCATAACGATATCGTGGAAATGCTGCACGGACCCATATATATAGAAACAGAAAAAGAAGA
ACCTTGATACTAAACCAGATCGAACAAGGGATCTTCTTGGAAATGGGAAGATCTAGGATAGGCGGCCAACCTCCTGGAAAGAGCGATGTGCATAGACCGG
GTGAGTAGGGATGCAGCTCCGTGGACCGCTCGTCGGGCCTGATAGGTGGTGGTATCACACCCTTCTCAAAGGAACCGTACGTGAGACTCTCGCCTCATAC
GGCTCCGTCCTGGAATCTGGGCCCCCCCCTTTCCTTTGACCAACGGGTCCTCGAACCCATGGGGGTTATGAATCATTCATTCATTGATTGATTCAAGGTA
GCTTTAGCCATTGTGGGTAGAAGCTAGTCGCCAGAAGCGAAGCGATCTTCCGGGCCGGAAAGGAGGCCTTTTTTTGACGCGTAAGCTACCGCAAAATGAA
TGAAGGAAAAAGGCCTCAGGATTAGAAAGACTAAAGAGGCATGGAGGGCCGACTACAAGACTACGACTACAATACAAGCCATGAGCGATAGCGAAGCCTG
AAGGCTTTTTTTCGAAAGCCCCACAACTAGCTATCTTATAGCAGACAACTAAGGCAAGCCTACTCAACTAATCTCATGTAAACGCCTGTTCGCAAAAATC
CAAATAGAAAAAGACAACTACTTATTAAACATGTAGTTGAGTGCTCCGTCGTTGTTCGGATCTTGACCGAGCCCAAGCTTCCCAAGCTCTATGCTGTTTG
GGAACTCCGCAAGGGTCTTACCACCTTCTTGATTGACTATATTTGAGTCTTTGGGGTACTTTGGGATTATATTCCGCGCCGAAGATTTGTGCTTGTGGGC
TAGGGTGAATATAGCGGACCAGCGGATCTAGTAGTTGACAATCGTTCGGACTTGGTAAAGGTTGTCGCAGCACCTGTAGTAGGACAGAGGACTTATCGCG
ATGCCCGCGGACCAATTTACTATGTCTCTGTCGCTGACGTTGGTCAAAGAGGCCACGTGGATTGGCCTGGGTCTTCTTCGGCTAATGAGACCTCGATCCC
GAAGCCTTCGGAGTATCTTTTTGATAGGCGCCTCTATCTGTATGGGGAATTCGCTGCTGAAAGATCCCGCCCAGTGCCCCCTTCCTTCCCCCGCCGCCTT
CCGACCAAAGGGAGTATACAATTTTGTCTTCAGGACACTCATGCCCGATCGTGAGACTGCCTGTTGAACGCCTGATGGCACCTTGCTCTGACCTGAGCTA
TGCAACAACGGGATCCCCCTTGATCTTTGCCGGATGTGCTTGACGGTCCCCCATAATACGCTAACTTGGGGACTTTTTAGTCCATTTTTTCCAAGAGTCT
CCGCTAGTTGAACCGCGTCCAGTAGACGACCTCTTCCGCTCATCCCCTTCGTCAGCTCTTTGATAGGGATACTATAACCTAGGTCCCTAAACTTGGAATG
GATGGCGGAGCGTAGGTGGCAGGCAGTTATATGGATACGGTGCTTTACCCGTAGACGCTTCTCCAGCTCTCGCAAGAATTGTATGGGAGTCGTCCTCGGG
GGGACTTCCCGAATGACCGTACCGAGGAATTCTACCGTACTCCGTGCAGCTATGGTTGTTGATTCTGCGGAGCCCACCCAAAGGTTCAGGCCGGATTGTA
GGAAGTGGGTGATACGTTTTTGTATTTCTATGAGAAGAAATACGGCACCCACGATTCCCAGTAGTAAGTCGTCGGCATATCGCGCGTAACAAATCCTTAT
TAATAAGGAATGGCTTTTAAAGGGGGCCAGCTTACGGGCCAGGCCTCTCTCTGACCTGATAACTAGTATCGCCTCCCCGCCCAGCTCTATCAGCAGGCCC
CTTCTTTTGCAATACTTAAGAAGGTCTCTCATGGCCAAATTCTTATTAAAGCCTTCTCTACCATTGAATTCGGCCCTCGGGGTCAACCCAGCGGCTTCTA
TGAGGAAGGCGGCGCAAAGGAGGCTCGAGGGCTTGTTAAGGAAGGCGGCTAGGGCCGCTGAAGGGGGGAAAACAAAAGGCGTTTTCTGGTCTCCCCTTCG
CCTGGGGGTGCTTGTGGGGGGGGTGTGCCACGACGAAACAAGGGAATGAAAGGTTGCTTTGCGTTGGATGCTCTTTACCCTCCCCACTATGAGGGCTCTG
TTGTCTTGGGGAGCGTTGAAGCCTGCTTCTTTTCCATACTTTTCTTGGTCATCAATACGACGACCTATTCTTAATAGAACCGATCTGATTTTCACTACAA
GAGGAATTTCGTGCTTCTGCCGGATCCTCCCTATCTCCTGATCGAGCTTGTGTAGGTAGATATTGCCTAGTAGGGCCGATAGTAGTACACTGTTTGGGAC
GGAGTCAGGGCCCTTCTCACCTCCTACGAGTCGTCCGGCGGAAAACTGTTTCTGAGTGGGGTAAAAGAACTTGGAATCGTCGATCTCTTCCTTCAAGATT
GAGATGAATCGATGTCGGTCGATGGTGTGAAAACACTTCCTGATGTCGAATTCCAAAAACCAGCGAGAGGTTCCCCACTCTTCTTTGATCCGTCTGAGGG
CCGAGTGGCAGCCTCGACCCGAGCGG