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Detailed information on CNT0002612


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0005984, E-value = 2e-27 (V. vinifera)
CNT0042639, E-value = 5e-28 (A. thaliana)
CNT0035385, E-value = 2e-08 (P. patens)
CNT0018989, E-value = 2e-27 (Z. mays)
CNT0022204, E-value = 2e-27 (A. trichopoda)
CNT0031477, E-value = 2e-30 (O. sativa)
CNT0009686, E-value = 8e-30 (S. tuberosum)
CNT0037993, E-value = 7e-21 (S. moellendorffii)

Expression of CNT0002612

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MLLLRLRINRISCLHFCFSLCYFVCTLQPHSLMLILILDYICCNSF*

>peptide 2 (56 aa)
MFLAENNAVTAFANQQDILFAFLFLSLLLCLYIAATFSYVDFDFGLYLLQFFLGFD*

>peptide 3 (57 aa)
PFLFFLILCCFSAASARVRKRRRVLFSFRDEGQVEEEAYEEAEEEAPKDETEIQVVR*

Sequence

>CNT0002612
CCATTCCTTTTCTTCTTAATCCTCTGTTGTTTCTCAGCCGCCTCGGCTAGGGTTCGGAAACGAAGAAGGGTTCTGTTTTCTTTTCGCGATGAGGGCCAAG
TGGAAGAAGAAGCGTATGAGGAGGCTGAAGAGGAAGCGCCGAAAGATGAGACAGAGATCCAAGTAGTGCGTTAAACCTAGTTTGTTTCCGTTGCTTTTAC
AATTGCTTATGTTGTCAAATAGGACACCCAGTTGTTAGTGGCACTGGTCTCTCCTTTTTGATGTTTTGATACATTTTGTTGGATTTTATTTCGTCTTATG
TTCTTAGCTGAAAACAATGCTGTTACTGCGTTTGCGAATCAACAGGATATCTTGTTTGCATTTCTGTTTCTCTCTTTGCTACTTTGTCTGTACATTGCAG
CCACATTCTCTTATGTTGATTTTGATTTTGGATTATATCTGCTGCAATTCTTTTTAGGGTTTGATTAAATTATCCCGATGTTAGATCTTAAGGCTTAATA
CTTAAATTCTCTGATGGCAA