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Detailed information on CNT0002798


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0007372, E-value = 1e-07 (V. vinifera)
CNT0043837, E-value = 4e-07 (A. thaliana)
CNT0035294, E-value = 2e-06 (P. patens)
CNT0017680, E-value = 2e-06 (Z. mays)
CNT0023383, E-value = 1e-07 (A. trichopoda)
CNT0031443, E-value = 4e-07 (O. sativa)
CNT0011121, E-value = 4e-07 (S. tuberosum)
CNT0039778, E-value = 2e-06 (S. moellendorffii)

Expression of CNT0002798

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MRNPAVVAGHYFMGINHSQMGSTTIIICQVL*

>peptide 2 (58 aa)
MGTKVQNLPGYYSMRDLNEESSSCGWPLFYGDKSLTNGQYYNNYLPSSVTDACSAYDKG

>peptide 3 (109 aa)
DVDKFHVTVLRRSFVCVKISYLGSLSLFKNVSLSKKKGPFFLLLIVCVLLREREREGGVAGPSRSKSPPFLQPDDDLSSFNGVATTPSLLFCLIKLLLAS
VLVTLLAFK*

Sequence

>CNT0002798
GGATGTTGACAAATTTCATGTCACTGTTCTTAGAAGGTCGTTTGTTTGTGTGAAGATTTCTTATCTGGGATCTCTCTCTCTCTTTAAAAATGTTTCTCTC
TCTAAAAAAAAAGGTCCATTCTTTCTTCTCCTTATTGTGTGTGTGTTGTTGAGAGAGAGAGAAAGAGAAGGAGGAGTGGCTGGCCCCAGCAGATCGAAAT
CTCCTCCTTTTCTTCAACCTGATGACGATCTAAGCTCCTTCAATGGTGTTGCTACTACACCCTCTTTGCTATTTTGTCTTATAAAATTGTTATTGGCTTC
AGTTCTAGTTACCCTTTTGGCCTTCAAATAGTGGGTGTCCAAAAAGATTCTGAATTTCTCTCTCTCTCTCTCTCTCTCTCTCTGATTTTGTTGGTGCCTT
GAATGGTGGAATCTCTGTGGGATTCTTGAGAGGAGGTGTTTAGAGGATGTGGGTCTGAGGAATGGGAACCAAAGTCCAGAATCTTCCAGGATATTACTCA
ATGAGAGATCTTAATGAGGAATCCAGCAGTTGTGGCTGGCCACTATTTTATGGGGATAAATCACTCACAAATGGGCAGTACTACAATAATTATCTGCCAA
GTTCTGTAACAGATGCATGTTCTGCATATGATAAGGGA