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Detailed information on CNT0028317


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|P92958|KIN11_ARATH, E-value = 2e-20

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0004985, E-value = 7e-11 (V. vinifera)
CNT0041036, E-value = 5e-12 (A. thaliana)
CNT0035294, E-value = 5e-12 (P. patens)
CNT0002061, E-value = 2e-08 (G. max)
CNT0023603, E-value = 2e-11 (A. trichopoda)
CNT0011121, E-value = 7e-08 (S. tuberosum)
CNT0038582, E-value = 7e-11 (S. moellendorffii)

Expression of CNT0028317

Peptides detected in this lncRNA

>peptide 1 (64 aa)
LSLSSSSSSPLSRHGRISLSLSLSLSLSPHSRAAPPSPSRARAKSEGSCSPPPLPLVRGAPEVR*

>peptide 2 (63 aa)
MEGAGRDGNPLGGYRIGKTLGIGSFGKVKIAEHILTGHKVAIKILNRRKIKSMEMEEKVRGHT*

>peptide 3 (85 aa)
SPSPPPPPLLSPVTGASLSLSLSLSLSPRTAAPRRRRLLGRGRRARAPARRRPSPSSAARRRSGRRWRELAEMGTLLAVTGLAKP*

>peptide 4 (113 aa)
LPLLLLLLSSLPSRAHLSLSLSLSLSLPAQPRRAAVAFSGEGEERGLLLAAAPPPRPRRAGGQVEDGGSWQRWEPSWRLPDWQNPRDWVIWQSEDRGAYI
DWSQGGNQDPQSP*

Sequence

>CNT0028317
CTCTCCCTCTCCTCCTCCTCCTCCTCTCCTCTCTCCCGTCACGGGCGCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCGCACAGCCGCGCCG
CGCCGCCGTCGCCTTCTCGGGCGAGGGCGAAGAGCGAGGGCTCCTGCTCGCCGCCGCCCCTCCCCCTCGTCCGCGGCGCGCCGGAGGTCAGGTAGAAGAT
GGAGGGAGCTGGCAGAGATGGGAACCCTCTTGGCGGTTACCGGATTGGCAAAACCCTAGGGATTGGGTCATTTGGCAAAGTGAAGATCGCGGAGCATATA
TTGACTGGTCACAAGGTGGCAATCAAGATCCTCAATCGCCGTAAGATCAAGAGCATGGAGATGGAAGAGAAAGTTAGAGGGCATACATGAGTAG