Detailed information on CNT0028701


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs
: nothing found

Most similar lncRNAs
:
CNT0005713, E-value = 5e-09 (V. vinifera)
CNT0041036, E-value = 3e-10 (A. thaliana)
CNT0035294, E-value = 8e-11 (P. patens)
CNT0002061, E-value = 8e-08 (G. max)
CNT0023759, E-value = 8e-11 (A. trichopoda)
CNT0013979, E-value = 3e-10 (S. tuberosum)
CNT0038582, E-value = 5e-09 (S. moellendorffii)
CNT0035597, E-value = 6e-18 (C. reinhardtii)

Expression of CNT0028701

Peptides detected in this lncRNA

>peptide 1 (29 aa)
RKAEEALSCITCNLRSATRLISSVGQRGR*

>peptide 2 (29 aa)
MILVDNFYQLFADIIVIFKIFRFSRVLTC*

>peptide 3 (46 aa)
EESGGGAQLHHLQPALSDEINFLRGAERTVAEAVLAPSRFPHDLSD*

>peptide 4 (48 aa)
MVKATASPQSLIMVDPTAHSSSGCCHQVMLGCVIEQWKMYLVYDPNVL*

>peptide 5 (55 aa)
MELDSASAHCLVFIDQLIYHLLFVTSCLLFTFTHMVTYSQICQQLISQNNWCILY*

>peptide 6 (46 aa)
MRPPSHSFRSLPCNLVWTDCISLSLSLSLSLPYSSFPQISLYFLPS*

>peptide 7 (35 aa)
MWDNINLETTFFFRDIILQISFVLWLGDSPPSIYN*

>peptide 8 (36 aa)
MIQMYYEENVCCIYKYIHVFCVQDVYRSLDGCQPFF*

Sequence

>CNT0028701
AGAGGAAAGCGGAGGAGGCGCTCAGCTGCATCACCTGCAACCTGCGCTCAGCGACGAGATTAATTTCCTCCGTGGGGCAGAGAGGACGGTAGCGGAGGCG
GTGCTCGCTCCCTCCCGGTTCCCCCACGACCTGAGCGACTGATGCGACCTCCTTCCCACTCGTTCAGATCCCTCCCCTGCAACTTGGTTTGGACGGATTG
CATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCTATTCCTCTTTTCCCCAAATTTCTCTCTATTTTCTACCTTCCTGAGATTCATACCGGAGCATC
CTGTCAGCGGCACCCACGACCTTGCCCAGCCGCCGCTGCATCAAACACTTCCGGCTCCAGCGCAGCCGCGCCTCCAACGTGTGTGCTGACTTCCTCGGAG
ACAAGAGCTTTACTCTTTACTCTTTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATT
GTTCGTTCCTTTACAGATTTTGCAAGTTTTCCCTTTCATCGCACAATCAGTTGATCTCAGTCAGTAACATGCTTGTTGGTTGTCCACACAGTTTGTCAAT
ATAAGCCTTCTTAAATTTTTTGAAAGTTCACTGGTCAGAGGCTTTTCACTGACTAATTAGGTTAGGAACAGCAAGGTACAGAAATTACTAAATGGAGTTA
GATTCAGCCAGTGCCCACTGCCTAGTGTTTATTGATCAATTAATCTACCACCTCCTCTTTGTGACCTCTTGTTTGCTATTCACATTCACCCATATGGTCA
CTTACTCACAAATCTGCCAGCAGCTGATCTCCCAAAATAACTGGTGCATACTATACTAGCTAGTTAAAGAAGAATACTTTTGTTGGCATTGACCACTCTG
ATGATCTCATTAGTACATTCCTTGTTGAGGATCTCGATTCATATATGATTCTTGTTGATAACTTCTATCAACTTTTTGCTGACATCATAGTAATTTTTAA
AATTTTCAGGTTCAGCAGAGTACTTACTTGCTAGGCTAACATTTTGCTGAATTTTCAGGCTCACTAGAGCAGCACAAACGATTTTCTTTTTATCGGTACT
GGATCAGATAGCTGTCACTTTGATTTTCATACATAAGTACATACTTTTGTGATCTTTTTCCCATGTACAATTCAACATATCTAGTTAGAACTTAATTACA
AGGACGTGTCTTACACATATGTATGTCATCATTAATTAAAACCTGTATGTTCTGTCTCTGATGATATGCACTGGAGACATATACCGATCACATAGGACAT
TGATTTTGATTTTTACTTACATGCCTTATGATATTTCATTTTGGTAGATACCATGTGGGATAATATCAATTTGGAAACGACATTTTTTTTCCGAGATATC
ATTCTACAAATATCATTTGTGTTGTGGCTGGGAGATTCACCTCCTTCAATATATAACTAAATTCCATATAGAGGATGGTGAAAGCCACAGCTTCCCCTCA
ATCCCTTATAATGGTTGATCCTACTGCACACAGTTCTTCAGGCTGCTGTCATCAAGTAATGCTGGGTTGTGTAATAGAACAGTGGAAAATGTATCTAGTA
TATGATCCAAATGTACTATGAGGAAAATGTTTGTTGTATATATAAGTATATACATGTATTTTGCGTCCAAGATGTGTATCGGAGCTTAGACGGTTGTCAG
CCATTTTTCTAGTCTAGGGATGATATGTGTAATTTTTGTGGCAATCCCTACGTGTGGGTAGAGATTGAACTGGAGAGATATTTTCAAAGTTTGCATT