Detailed information on CNT0028858


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs
: nothing found

Most similar lncRNAs
:
CNT0003478, E-value = 2e-07 (V. vinifera)
CNT0045095, E-value = 2e-07 (A. thaliana)
CNT0034279, E-value = 2e-07 (P. patens)
CNT0013596, E-value = 3e-06 (S. tuberosum)

Expression of CNT0028858

Peptides detected in this lncRNA

>peptide 1 (74 aa)
MSTSPQFCVNLIAAYGFHFATAVTLLLPTSSQLAVASECRRYNPSRCHIKSRESPPLLSFSCLDVLTARWPYSL*

>peptide 2 (34 aa)
MAPPFFCCCPLETCAFTLPLGLQQLDYPYNCLPV*

>peptide 3 (51 aa)
MCVHTAIRASTTGLSLQLLTSLSSRVIHVLTANMQYQLGNEHMADGVGLSM*

>peptide 4 (42 aa)
MSIWPMGLASQCDYVSTECISMSGTYYALIIGWEQVHTTLYT*

>peptide 5 (97 aa)
PFRAPVCSGSGSSARLFAVVAVTTSRVVGAKQVLRGSPDHFSGASRLETRRDDRRFLWFLGYFFFFFFFFFFFAGDVKIVWKPCGKSRDVNESAILR*

Sequence

>CNT0028858
AGCCGTTCCGGGCGCCGGTTTGCTCCGGCTCCGGGAGCTCGGCGCGTTTGTTTGCGGTCGTGGCAGTAACGACTAGTAGAGTAGTAGGAGCGAAGCAAGT
GCTCCGCGGAAGCCCTGACCATTTCTCAGGCGCGTCGAGACTCGAGACGAGACGAGACGACCGTCGTTTTCTTTGGTTTCTTGGGTACTTCTTCTTTTTT
TTTTTTTTTTTTTTTTTTTTTGCAGGTGATGTGAAAATAGTGTGGAAACCGTGTGGGAAGTCTAGAGATGTCAACGAGTCCGCAATTCTGCGTTAACTTA
ATCGCAGCCTACGGATTCCATTTCGCCACTGCAGTTACCCTGCTACTGCCTACGAGCTCCCAGCTAGCAGTGGCATCTGAGTGCAGAAGATACAATCCAT
CTCGTTGTCATATTAAAAGTCGGGAATCCCCACCACTACTATCTTTTAGTTGTTTGGATGTTCTAACTGCAAGGTGGCCATATTCCTTGTAAAATAACAT
GTACGCCGATTATGTCTGATTCGATTAGATGCATCTTTTCAACATATTGGCTGTTTCAGCTGCACTCGATTTCTTAGCGAGTTATTGAGCACGAGCTGGT
AGTGTTATTTATGTGCGTGGTTATTGCAAGATGGCCCCGCCCTTTTTCTGCTGCTGTCCTTTGGAAACATGTGCGTTCACACTGCCATTAGGGCTTCAAC
AACTGGACTATCCTTACAATTGCTTACCAGTTTGAGCAGCAGAGTCATCCATGTTCTGACTGCAAACATGCAATATCAGCTAGGAAATGAGCATATGGCC
GATGGGGTTGGCCTCTCAATGTGATTATGTTAGCACAGAGTGCATTTCCATGTCAGGAACCTATTATGCACTCATAATTGGATGGGAGCAAGTTCATACA
ACTCTATACACATAGAGCAAGTTAATACAACTCTATACACATAGAGCTAATAATTCATATGGCGGTTATCATTGTGGGGTCAAGCAAGCAAGCTATCTTC
TATTGTATCTTATAAACGT