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Detailed information on CNT0002977


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0003887, E-value = 2e-10 (V. vinifera)
CNT0043564, E-value = 1e-08 (A. thaliana)
CNT0034328, E-value = 8e-10 (P. patens)
CNT0019907, E-value = 8e-10 (Z. mays)
CNT0022384, E-value = 3e-09 (A. trichopoda)
CNT0031899, E-value = 3e-09 (O. sativa)
CNT0015823, E-value = 5e-08 (S. tuberosum)

Expression of CNT0002977

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MRFQHQAIYIYIYIYIYALRLGLLSCPFNKDHS*

>peptide 2 (55 aa)
MRMLGSNMPYLLFFIFFINQVNLSYPHLLDYLPLMSHDDKPILLIYLPNVFAKIQ*

>peptide 3 (53 aa)
MVVVMTKASCGGSGSGGGMVVMVVAMTTTITNHLASVPNVQVVKTRKSECRFP*

>peptide 4 (56 aa)
SATDLNFGVGYFFRTMVWTSHYSAENMLIDLCAPQKGNKIFYLWRGICLLILVMFS*

Sequence

>CNT0002977
GTCTGCAACAGATCTAAACTTTGGGGTGGGATATTTCTTTAGGACTATGGTTTGGACGAGTCACTACTCAGCAGAGAACATGCTAATTGATTTGTGTGCA
CCGCAAAAGGGGAATAAGATTTTCTACCTATGGCGAGGTATATGTCTGTTGATTTTGGTTATGTTCTCATAACTTTTATTGTTTTCAGCTTTTAGTCCAA
AATCGTGCAGAGCTTGATAACACAGAAGAGTTCAGTTGCCACTTGTCCAATCCATAGTTTTAAAGGAATGAACCCCTCAAAATTTTTGTTTCTATGAGAT
TTCAGCATCAAGCTATATATATATATATATATATATATATATATGCCCTTCGATTAGGTCTCCTCTCTTGTCCTTTTAACAAAGATCACTCTTAAAGTCG
ACATGCAAAGTCCAGGAGCCCACTTTGGCCATGTCCACCTTGATGTGTCTCAGCTTCAAGTTTTGGTAAGTATAATAGTGATGGTGTGATGGTGGTGGTG
ATGACAAAGGCAAGCTGTGGGGGCAGTGGCAGTGGTGGTGGAATGGTGGTGATGGTGGTAGCTATGACAACGACAATTACTAACCATTTGGCAAGTGTAC
CAAATGTCCAAGTAGTAAAGACTCGGAAGTCCGAGTGTCGATTTCCATAGGGACTTTGTTTTGTATTTGTGTTGGATAATTTTCAATTTATAAGAGGAAA
AGATAAAATGAGGTAAAAAAATATGAATTTAAAAGAACAGGATATAAAATAATAAATATTAATAGACAAAAGAAATAATAGAGACTTCAATGAGATGAGA
ATGTTAGGATCTAACATGCCTTATTTGTTATTTTTTATTTTCTTTATCAATCAGGTGAATTTATCCTACCCACATCTATTAGATTACTTGCCCCTGATGT
CTCACGATGACAAGCCTATTTTACTTATCTATCTCCCAAATGTATTTGCAAAGATTCAATAGATAAAATGCATGAAGTTCTAATTCTAGATGTTTGCTTT
GATGCATGGGTATAATGAAATCACTCTATGTCTAGCAAAGATTTTA