Detailed information on CNT0029849


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs
: nothing found

Most similar lncRNAs
:
CNT0004408, E-value = 7e-14 (V. vinifera)
CNT0044994, E-value = 1e-06 (A. thaliana)
CNT0035188, E-value = 2e-07 (P. patens)
CNT0019015, E-value = 2e-08 (Z. mays)
CNT0002871, E-value = 1e-06 (G. max)
CNT0021841, E-value = 2e-08 (A. trichopoda)
CNT0008755, E-value = 2e-08 (S. tuberosum)
CNT0038248, E-value = 1e-06 (S. moellendorffii)

Expression of CNT0029849

Peptides detected in this lncRNA

>peptide 1 (65 aa)
MHHQNRRAFCPFFPELLFHTSPISSDRKNLKKYKLVHVYPKWCLVGGTKVGLNFNPFLENISYRG*

>peptide 2 (30 aa)
MHVCVADENEIARLPVLGKPPARPTRACRC*

>peptide 3 (49 aa)
MPLLVDKFLNHTPPATTTTTTSMHASPKQTSVLSFFSRAFVPHLSHFFR*

>peptide 4 (45 aa)
MEEEVEYGVCMVFVRTYVSASESLGWRTSSFLYSWLLVVFDRSSS*

>peptide 5 (46 aa)
MEYAWCSSVRTCQRARASVGARRPFCIAGSWLCLIDRLANVGDQIN*

>peptide 6 (30 aa)
MCVLLMRMRSLGCRCLENHPPGRRVHAAAS*

Sequence

>CNT0029849
AATGTCTCTCCGGCCCCTCTGAATCCATCCTTAAAGACTAAACCCTCCATAAGCCTCCTCTCTCTCTTTCTTCCAGGAGACAGGTGACAAGGGGGATAGA
TACACAACGATACTCCGCAGCGCAGGAGGAGGACACATCCTTGATTTCTGCCATCGGAGGAGCTCCTGCCTCGGAGATACACGAAGCTGCTACATCTTCT
TCCAGCTCAATCGTATCGACGCTTGCATCTCTTTTGCTCAGAGTGATCGTCGTTTTTCACAGCTTGGTAAGATCACTTCACTCTTCTCCCTAGCTTCGGT
ATTGATCGATCTTCCTCTCGCTGTGCCTGCAGCAAATGTCTTTAAGCTCATGTAATCCGTGCCATCTATCACCTGTGTGTTCATACTGTGTCACTATCAG
TAAGCCGGATGCATGTTAGGCTGTTGACCTGTTGTTAGCTGCACCGGCTAACTGTAGTGAGCAGTGACCTTAATTTCTTTTGCACTACATAGACTGCTTG
TTCTTTTCTTCTTGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGGGAGGGAGGGCCATAGCATAAGCCATGGAGGAGGAGGTGGAGTATGGAGTATGCAT
GGTGTTCGTCCGTACGTACGTGTCAGCGAGCGAGAGCCTCGGTTGGCGCACGTCGTCCTTTCTGTATAGCTGGCTCCTGGTTGTGTTTGATCGATCGTCT
AGCTAACGTCGGAGACCAGATTAATTAGACATGACCTGACGTGCTTAATTAAGCTCTCCAGAAATGATTAATTAGCTACCAAGTGGTCGTTGTGGCTGTG
CTGCTGCTGCCGCTGCTGATTGCGTCGCGACGAGGGTACTGATGCTAGCGTCGCCATGGTTAAAACTTAACTACGCTTAAATTGCAGCCTGATAAAAGAT
CGATACTACGGGTCAGGTGGCAGCTATCCGTCAGGGTTTCAGTCTGAAGCGGTTTAGGTGAAGAGCTGGAGAAGGAGTAAATGCATGTGTGTGTTGCTGA
TGAGAATGAGATCGCTCGGCTGCCGGTGCTTGGAAAACCACCCGCCCGGCCGACGCGTGCATGCCGCTGCTAGTTGACAAATTCCTCAATCACACGCCCC
CCGCCACCACCACCACCACCACCAGCATGCATGCATCACCAAAACAGACGAGCGTTTTGTCCTTTTTTTCCAGAGCTTTTGTTCCACACCTCTCCCATTT
CTTCAGATAGGAAAAATTTAAAGAAATATAAGCTGGTGCATGTATATCCTAAGTGGTGTTTGGTTGGAGGGACTAAAGTAGGGCTAAACTTTAACCCCTT
TCTCGAAAACATAAGTTATAGGGGCTAAAGTTTAGCCCATCTCTCCCAAACACCCCCCTAGTACTGCAGTACATGGTTCATGCAGGCTCAAAGTGAG