Detailed information on CNT0030024


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs
: nothing found

Most similar lncRNAs
:
CNT0007064, E-value = 8e-06 (V. vinifera)
CNT0012829, E-value = 2e-06 (S. tuberosum)
CNT0035638, E-value = 3e-08 (C. reinhardtii)

Expression of CNT0030024

Peptides detected in this lncRNA

>peptide 1 (121 aa)
ATTYFPLNTHTHSLSLSHWPVTLLPSPPLPSLPIQPEEGSDGGTAALPLFLPARGGGATAAARTRRRGWRRQRGRGGAPPLSSPLLHLAGGGGATAVARM
RRRRCGRGDGGGGSPSFPPRS*

>peptide 2 (40 aa)
GHHLFPSQHTHTLSLSLSLARHSPPLPSPPLPPNPTRGGE*

>peptide 3 (88 aa)
RPPLISLSTHTHTLSLSLTGPSLSSPPLPSPPSQSNQRRGVTAARRLCLSSSLLEEEERRQRRERGGVDGDVSADGVAPPLSPPRSYI*

>peptide 4 (66 aa)
MATSARTGWRPPSLLPAPTSSWRRGSDGSGADEAAAVRTGRRRRRLPLFPSPLLDLARGGGATVAV*

Sequence

>CNT0030024
CGGCCACCACTTATTTCCCTCTCAACACACACACACACTCTCTCTCTCTCTCTCACTGGCCCGTCACTCTCCTCCCCTCCCCTCCCCTCCCCTCCCTCCC
AATCCAACCAGAGGAGGGGAGTGACGGCGGCACGGCGGCTCTGCCTCTCTTCCTCCCTGCTAGAGGAGGAGGAGCGACGGCAGCGGCGCGAACGCGGCGG
CGTGGATGGCGACGTCAGCGCGGACGGGGTGGCGCCCCCCCTCTCTCCTCCCCGCTCCTACATCTAGCTGGAGGAGGGGGAGCGACGGCAGTGGCGCGGA
TGAGGCGGCGGCGGTGCGGACGGGGCGACGGCGGCGGCGGCTCCCCCTCTTTCCCTCCCCGCTCCTAGATCTAGCGAGAGGAGGGGGAGCGACAGTGGCG
GTGTAGACGGCGACGGCGGCACGGACGCGGGCAACGGCTGCGCGGAGGCGGCTCCCCTCCCCTCCCTCTCCCAAATCTGGCCCCTACGAGGAGTGGGGAG
GACGGTGGTGGCAGCGGACTCCTCCCTCCCTCCCAGATCCGGCCCGAGGGGGGAGGGTGACGGCGGCGGCCACTGCACACAAAAGAGTTCGCCGGCGACG
ACGACGTTGCTTTTTTTTTTAAGTTTACTTGTTGATTAATGTTAACTTGTAAGTTGATGTTGTGGATTTGAATCCAATGCTTTGTGTTGATATATGGATG
TTTGTGATTGGATTTTGTTTCCTGGATGAGATTTGTGAG