« Back to Oryza sativa search


Detailed information on CNT0030093


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0005350, E-value = 2e-07 (V. vinifera)
CNT0043554, E-value = 5e-08 (A. thaliana)
CNT0021710, E-value = 5e-08 (A. trichopoda)

Expression of CNT0030093

Peptides detected in this lncRNA

>peptide 1 (76 aa)
ASARTLAGQVSARARILSLSHTHTHTFLPPHLSLGFALTLTLPFLFLEFALTLASLLDPGASYHCLNHSTNRSSRQ*

>peptide 2 (66 aa)
GVRPHPRRPGERPCAHPLSLSHTHTHLPTPTPFSRIRANPNPTFSFSRIRFNPSFSSGSGSFVSLP*

Sequence

>CNT0030093
CGGCGTCCGCCCGCACCCTCGCCGGCCAGGTGAGCGCCCGTGCGCGCATCCTCTCTCTCTCTCACACACACACACACACCTTCCTACCCCCACACCTTTC
TCTCGGATTCGCGCTAACCCTAACCCTACCTTTTCTTTTTCTCGAATTCGCTTTAACCCTAGCTTCTCTTCTGGATCCGGGAGCTTCGTATCATTGCCTT
AATCATAGCACTAATCGCAGTTCTCGACAATAGAAAATGGGGGCTTGATGTTGGATTTTGCGTGTTTGCAGTGTTCGATTGAGCGAGGGAACGGACAGGG
GTGGAGGAG