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Detailed information on CNT0031808


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0005469, E-value = 5e-07 (V. vinifera)
CNT0043837, E-value = 2e-06 (A. thaliana)
CNT0033155, E-value = 8e-09 (P. patens)
CNT0018566, E-value = 2e-06 (Z. mays)
CNT0002397, E-value = 2e-06 (G. max)
CNT0023676, E-value = 1e-10 (A. trichopoda)
CNT0012080, E-value = 2e-06 (S. tuberosum)
CNT0039778, E-value = 2e-06 (S. moellendorffii)

Expression of CNT0031808

Peptides detected in this lncRNA

>peptide 1 (110 aa)
FITLSLSLSLSPLQLIQVQIRRERAIELGVELYSYLFQCINGGLAWLGDDGVNQEEALEEIERRRRRRGGEMKKQEKEGGGGGISKVVREHKARLYIIRR
CVVMLLCWHD*

>peptide 2 (39 aa)
LLLSLSLSLSLLCSLYKSKLDASEQSSLVLSCTPTCSSV*

>peptide 3 (44 aa)
MQQCHLILASPEFFISRRLSFFSLLLVVILYLLLLLIFKPAYIH*

Sequence

>CNT0031808
TTTTATTACTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTGCAGCTTATACAAGTCCAAATTAGACGCGAGCGAGCAATCGAGCTTGGTGTTGAGTTGTAC
TCCTACTTGTTCCAGTGTATAAATGGAGGCCTGGCTTGGTTGGGAGACGATGGAGTCAATCAAGAAGAAGCTCTTGAAGAGATAGAGAGAAGAAGAAGAA
GAAGAGGAGGAGAGATGAAGAAGCAGGAGAAGGAAGGAGGAGGAGGAGGAATAAGCAAGGTGGTGAGGGAGCACAAGGCCAGGCTCTACATCATCCGCCG
CTGCGTCGTCATGCTCCTCTGCTGGCATGACTGATCCAATCCAATCCAATCCATCAACCAACCCATATGCAGCAATGCCACCTCATTCTAGCTAGTCCTG
AATTCTTCATCAGTCGTCGTTTATCATTTTTTTCTCTTCTTCTTGTTGTAATTCTCTATCTTCTTCTTCTTCTGATCTTCAAGCCCGCTTATATCCATTA
GCTCATTACCAAGCTTGTATATATGTCTATTTAGTCTTCTAACCAATGATATTATAGCAAGCTAGATATATAGCTTAATATTTAGCCACTATAGCGCTTA
CCTAGATTCTTTGCTCTTCGTCTGTTTTTGCCCCCCTTCGTTATTCCAATTTTGTTTTAATTTAATCTACTTTCATTTCTTCTCTTTCTTGCAACATTAA
TTACTGTTCCGTT