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Detailed information on CNT0031899


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|P27061|PPA1_SOLLC, E-value = 2e-08

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0003878, E-value = 3e-11 (V. vinifera)
CNT0043564, E-value = 3e-11 (A. thaliana)
CNT0035158, E-value = 8e-12 (P. patens)
CNT0019093, E-value = 1e-10 (Z. mays)
CNT0002248, E-value = 1e-10 (G. max)
CNT0022384, E-value = 5e-10 (A. trichopoda)
CNT0015823, E-value = 7e-09 (S. tuberosum)

Expression of CNT0031899

Peptides detected in this lncRNA

>peptide 1 (152 aa)
MQMEIADLRFYSLTHPMGCIYSKYINYSISELQRKKRRILMSHVSTIIRSWNKRIGGAPIPSTRSALPTLQRRARATMACSAQSAQGRGRERRRHALRRV
LREGRRIGNGAEVGCVDRSAGAQLKPELYPFCFGFKLMFTPDFGAQHAVGDF*

>peptide 2 (51 aa)
MRMFDVNEMLLSNLPYYADHRYRYIVDRWSTSTPISEPTQLHAHYLNSTFF*

>peptide 3 (35 aa)
MLHLPNANGNCRSKVLQLNTSNGLHIFEIYKLLYF*

>peptide 4 (37 aa)
MLCAECSGERARATTACSAQSAQGRTSHRQWCRGRMC*

>peptide 5 (44 aa)
MTWLQFVIRFKIDLGKLDSPVNLNMYSWALWILTLSCTTIVFSL*

>peptide 6 (44 aa)
MLNLDHWAHLNMMLLLKPKSECQSVTNQFWPSFSFFWIAISVVV*

>peptide 7 (41 aa)
MSMRCCSPTSPTTPTTDTDTSSIAGPPPRPSLNPRNSTPII*

>peptide 8 (34 aa)
MMHVQLNKDTTFSLLYSAYAMVLHAIFFFWVRKSP

>peptide 9 (134 aa)
MVDLSYQVKREHHECFATDSAREWRMMCTPPHRVLILPEKWLNTRMLLPLVLVSGCRSVLRRGRSSTKNLKRRSMQRSLNKRRQNLKGRKTTQRRGSPCL
RSAPATCGSSSPTWPTVPTLRSLHGRRPPSTGYE*

Sequence

>CNT0031899
CAGGACGAACTGACCTAGGCGGCATCTAGGCCATACCAACCAACGTCGGCCATCCTCCCCAACCATGATGAGGGTAAATAGGAGGCGACGAGGCTATCCC
AGCGTCTATCAACATCGCTGATCCTGAATCTCCTACGACATCGATGGTGACCTACCAATTTATTCCTTTTCCTTGATTTTTTGAAGCCAATTTCGGAATT
TGGCATGGAAATAATACGGATTTGTGTGCTCCCTTTTTGTTTTGTTGTTTCATCCTGATCCCGAACATAATCTAGACATCAAGTTCAATGATATTCTACA
AGTTACAATTTTGTCAATTTTTAGTTGCAATTTAGTAAAAATTAATTACAGATTTCTGTGATGTGATATAGCATGTTAAATCTGGATCACTGGGCACACC
TCAATATGATGCTTCTTCTGAAGCCCAAGAGCGAGTGTCAATCTGTCACCAACCAATTTTGGCCGTCCTTTTCTTTCTTCTGGATTGCAATTTCAGTTGT
TGTTTAGTTAGCACAACACAATTAATGTGCATCCAAGTTGTGATGCTTGCCAAAAAGAAAATGGTATTGCCGCTCCGCTGATAGTTCATAATGGCGCTGT
TTGGTGTTTGCGTGGCCTGAAATGGTTGATCTTTCATATCAGGTCAAACGAGAACACCACGAATGCTTTGCAACAGATTCTGCCAGAGAATGGAGGATGA
TGTGCACTCCACCACATCGAGTACTAATACTCCCTGAGAAGTGGCTCAACACTAGAATGCTACTGCCACTGGTTTTAGTTTCAGGTTGCAGGAGCGTGCT
GAGAAGAGGAAGAAGTTCTACCAAAAATCTGAAGAGAAGATCCATGCAAAGGAGCTTGAACAAACGCAGGCAAAATCTAAAGGGGAGGAAAACAACCCAG
CGACGTGGAAGTCCGTGTCTGAGGAGTGCGCCGGCTACATGCGGGAGTTCCTCACCGACCTGGCCTACTGTTCCAACGTTGAGGTCGTTGCACGGGAGGC
GACCGCCTAGCACGGGCTACGAGTGACGGCGCAGCATGCGGATGTTCGATGTCAATGAGATGCTGCTCTCCAACCTCCCCTACTACGCCGACCACAGATA
CAGATACATCGTCGATCGCTGGTCCACCTCCACGCCCATCTCTGAACCCACGCAACTCCACGCCCATTATCTGAATTCTACATTTTTTTGATTGCTTTCG
ATCCTACCAAACATGTATTAATAATATATATATAGGATTTGTTTTATATATATATATATATATATATATATATATATGTAGCAGGTTGTGGTACTATTAT
GCACAATGGATTATGTGTTTTTGGTCACTATGTACTGGCTGCATATAACTAATTTTTGGCCAAGAACTATGGCGGCTTACGCATAGACTCACTAGAGGCC
AATAAAAATGTCAAATTCTATGCCGCCACTGAAAGAAATTAGTTAATTTATGGTATTAAGCTCGCTAATGTTGGTCCGATATGACATGGCTGCAGTTTGT
TATTAGGTTTAAGATCGATTTGGGAAAACTAGATTCTCCTGTAAACTTGAACATGTATAGTTGGGCACTGTGGATTTTGACTCTTTCTTGCACTACAATT
GTGTTTTCCTTGTAAAATAGACCATCTCTGGATGTTACACCTTCCAAATGCAAATGGAAATTGCAGATCTAAGGTTCTACAGCTTAACACATCCAATGGG
CTGCATATATTCGAAATATATAAATTACTCTATTTCTGAGTTGCAGAGAAAGAAAAGGAGAATTCTCATGAGTCATGTCTCAACAATTATCAGATCATGG
AATAAAAGAATAGGAGGGGCGCCGATTCCCTCCACCCGCTCTGCCCTCCCCACTCTGCAGAGAAGGGCACGGGCGACGATGGCATGCTCTGCGCAGAGTG
CTCAGGGGAGAGGGCGCGAGCGACGACGGCATGCTCTGCGCAGAGTGCTCAGGGAAGGACGTCGCATCGGCAATGGTGCAGAGGTAGGATGTGTTGATCG
CAGCGCAGGTGCTCAACTGAAACCTGAATTGTATCCATTTTGTTTTGGCTTCAAACTTATGTTCACACCTGACTTTGGTGCACAACATGCAGTTGGGGAT
TTTTGACGTGTCTTCAGGCTGTTCTCGATGAGCTGTTAATTAAATGAAATGTCAAGTGATTTTCTTGAACTTGATCAGACAAAGAAACTATATTAGGGAA
ATATTCATGACCTGTTAGTCTGAAGCGGAAGTAGAATCAGATTTAGCAAATGCAGATGTAGAATCAGATTTTAGCAAATGCAGATGTAGAACTATCCAAG
CAGATTGATCGGGCACAATCTTACTGTGCCATTGCCAGTCATCTATTCAAGCACAGAGCAAATTTAACTCAAGATTGTGAGATGATGCATGTACAACTGA
ATAAAGATACAACCTTTTCTCTGCTCTATTCTGCATATGCCATGGTCCTCCATGCTATCTTTTTTTTTTGGGTACGTAAATCACCC