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Detailed information on CNT0032384


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0004985, E-value = 3e-11 (V. vinifera)
CNT0042889, E-value = 3e-11 (A. thaliana)
CNT0033726, E-value = 3e-11 (P. patens)
CNT0002061, E-value = 8e-09 (G. max)
CNT0022124, E-value = 8e-12 (A. trichopoda)
CNT0011121, E-value = 1e-07 (S. tuberosum)
CNT0038582, E-value = 2e-12 (S. moellendorffii)

Expression of CNT0032384

Peptides detected in this lncRNA

>peptide 1 (84 aa)
SSLSPLSIPPPLSLSPPSSLSLSLSLSLTLSTLDPSSPSSGRRCSQQAAARGDAARADRGGDARAGCGGGAWAAHDGGSGDEKA*

>peptide 2 (116 aa)
HLSLHSRSLLPYPYPLPALSLSLSLSLSLSPLSIPPLPAPGGGAPSRRRLAATLRGRIEAAMHGQVVAVALGQPTTVDPATRRRETVDPAAAFGGRSSGG
NSIRRRIHRCLVLGVA*

>peptide 3 (111 aa)
LISLSTLDPSSLILIPSQLSLSLSLSLSHSLHSRSLLSQLRAAVLPAGGGSRRRCAGGSRRRCTGRLWRWRLGSPRRWIRRREGVRRWIRRRRSEADLAA
ATPFGGGSTAA*

Sequence

>CNT0032384
CTCATCTCTCTCTCCACTCTCGATCCCTCCTCCCTTATCCTTATCCCCTCCCAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACTCTCTCCACTCTC
GATCCCTCCTCTCCCAGCTCCGGGCGGCGGTGCTCCCAGCAGGCGGCGGCTCGCGGCGACGCTGCGCGGGCGGATCGAGGCGGCGATGCACGGGCAGGTT
GTGGCGGTGGCGCTTGGGCAGCCCACGACGGTGGATCCGGCGACGAGAAGGCGTGAGACGGTGGATCCGGCGGCGGCGTTCGGAGGCAGATCTAGCGGCG
GCAACTCCATTCGGCGGCGGATCCACCGCTGCCTAGTCCTAGGTGTTGCTTGAGGCATAGGAGTATAGCCAATGATGGATCGGGACTAGGCTTAGGAGAA
GTTGAGGTCTAGATGGTAAGTATATCATGCGGGATGCTCAGTCTAGAGAATAATGCACGTGGAGGTGAATGATTTCATATGGCATACACGTGGTGTTGTG
TGTATGGAAAGATAAGTCAAATTTGGATTAAAGTCCAAGTTTAAAAAGATTGGACTGTGGAGTTGTATGGGGATCTTGTTTCCCTGGTTTGGTAGGTTTT
CTATATAATTAGGAGTCCTAGTTCTAGTTGGATTCGTGGCTAAGGGCAACCATGTTGTAGTTATAAATAGAAGAGAGGTTGAGACTAGAAA