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Detailed information on CNT0032570


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|P93276|M030_ARATH, E-value = 4e-11

BLAST vs NONCODE (A. thaliana): nothing found

Potentially orthologous lncRNAs:
CNT0040425 in

CNT0014407 in S. tuberosum

Most similar lncRNAs:
CNT0005364, E-value = 3e-15 (V. vinifera)
CNT0040425, E-value = 9e-68 ()
CNT0032811, E-value = 6e-07 (P. patens)
CNT0014407, E-value = 7e-124 (S. tuberosum)

Expression of CNT0032570

Nothing found.

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MMEKPASSKRRLCCRSAPYGVVQSQQPFWGASIGNTGLMTGWGAQ*

>peptide 2 (40 aa)
LGKFVYKGYGGAVIIGSPIGKPYPSSVASLRSLDFSNLAN*

Sequence

>CNT0032570
TTTAGGGAAATTCGTTTATAAAGGATATGGAGGTGCTGTGATCATTGGATCTCCGATCGGGAAACCGTATCCAAGCTCCGTGGCTAGTCTGCGCTCTTTG
GACTTTTCAAACTTAGCGAACTGAAACATCTGAGTAGCTAAAGGAAGGAAAATCAACCGAGACCCCGTTAGTAGCGGCGAGCGAGAGCGGAACAAGGGTT
TTCATCAAAAGAAATCCGAAGCGGTTTCATTCGATTTGTTGTGGATTGGATGATGGAAAAACCAGCAAGCAGCAAGCGTAGGCTGTGTTGCCGTAGCGCG
CCCTACGGAGTTGTACAAAGTCAGCAACCGTTTTGGGGCGCAAGCATAGGCAACACAGGACTGATGACGGGGTGGGGCGCGCAGTGAACTGGTTTTCTAA
AAAGATTGGAAGATCCGGCCAAAGAAGGTGATAGCCCTGTTCATTCGTTCCCATGGTTCGATCCTTCCCAGTAAAACGCGGCGTGTTCGAATGATGATCG
CTTTTACGCGAGAAAGGGGGACCACCCTCTAAGCCTAAGTATTCCTCAATGACCGATAGCGTACAAGTACCGTGAGGGAAAGGTGAAAAGAACCCCAATC
GGGGAGTGCAATAGAGAACCTGAGATCCGATGCGAACAATCAGTCGAAGGAGCGGAGCGCGGGCGCACTCACTCTAACGGCGTACCTTTCGCATGATGGG
TCAGCGAGGAAATGGGAACAGCGGCTTAAGCCATTAGGTGTAGGCGCTTTCCAGAGGTGGAAGATTTACGTTCTTCCTATTTGACCCGAAACCGATCGAT
CTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGAGGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAATT