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Detailed information on CNT0032811


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q8TGM6|TAR1_YEAST, E-value = 6e-13

BLAST vs NONCODE (A. thaliana): nothing found

Potentially orthologous lncRNAs:
CNT0024300 in O. sativa

Most similar lncRNAs:
CNT0043803, E-value = 1e-06 (A. thaliana)
CNT0019112, E-value = 9e-08 (Z. mays)
CNT0024300, E-value = 9e-45 (O. sativa)
CNT0014187, E-value = 9e-08 (S. tuberosum)
CNT0036264, E-value = 3e-07 (C. reinhardtii)

Expression of CNT0032811

Nothing found.

Peptides detected in this lncRNA

>peptide 1 (75 aa)
RFGSQSRSLPFPSLPFLLFEKTRGGGGGGGGRETSRSRPLIRKDYPLSLSISLSGGEETNQDFPSNGERTGKSPA*

>peptide 2 (39 aa)
GLDPKAGPFPSLPFPSSCLKKLEEEEEEEEEEKRPAADL*

>peptide 3 (35 aa)
MPKRVTAPSRPVFYCCSTRRDLRVGLFGNAALSGR*

Sequence

>CNT0032811
CAGGTTTGGATCCCAAAGCAGGTCCCTTCCCTTCCCTTCCCTTCCCTTCCTCTTGTTTGAAAAAACTCGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGAA
ACGTCCCGCAGCAGACCTCTGATCAGGAAAGACTACCCGCTGAGTTTAAGCATATCACTAAGCGGAGGAGAAGAAACTAACCAGGATTTCCCTAGTAACG
GCGAGCGAACCGGAAAGAGCCCAGCTTGAAAATCGAGGTGCTTCGCACCTCGAATTGTAGTCTGGAGAAGCGTCCTCTGCAGCGTGCCGGCCCCAAGTTC
CCTGGAATGGGATGCCCAAGAGGGTGACAGCCCCGTCGAGGCCGGTTTTTTATTGCTGCTCCACGAGGCGCGATCTGCGAGTCGGGCTGTTTGGGAATGC
AGCCCTAAGTGGGAGGTAAATTCCTTCTAAGGCTAAATATTGGCAAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGAAAAGGACTT