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Detailed information on CNT0033199


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0006516, E-value = 1e-06 (V. vinifera)
CNT0002951, E-value = 4e-06 (G. max)
CNT0023377, E-value = 4e-06 (A. trichopoda)
CNT0029013, E-value = 7e-08 (O. sativa)
CNT0037273, E-value = 3e-07 (C. reinhardtii)

Expression of CNT0033199

Peptides detected in this lncRNA

>peptide 1 (73 aa)
MREEQHRSKAPVLEKGASSGTIALIEGREFEGVVFRFSFNGDAITTDSRHTREISSQFFFFFFVCVCVCVCLY*

>peptide 2 (39 aa)
MGWVGGCSTACLLLASSKLARLSLNFSSMVQKARRGSGI*

>peptide 3 (63 aa)
MKSCVMHGNLWHILSVSACVKISRLNPINWVESPRVVDFYGLGRWVFHGVPAVGFFKTRASFS*

>peptide 4 (108 aa)
MSAARCVKSNIGARRQFWRKVPVLEPSPSLKGENLRGLYLDFPSTATQSRRIRDTHERSRLNFFSSFLCVCVCVCVCISASVAVPTQPLTQIHPNCWHKL
PRDEQREE*

>peptide 5 (40 aa)
TNRNKKNIEQYKTQEQLYIGLPTQEKDLFPTPLIDAYQRR*

>peptide 6 (52 aa)
MYIYFFAFFLSSCSITKVSGSKLGITFSRHIVGMAKQNPLRMTAPHYDETDT*

>peptide 7 (35 aa)
MMKQIHNSKGSSPWSFPATSDVVTSVEIIKIAKRS*

>peptide 8 (30 aa)
MNANMPQLLNAKDCLSNKTTYTSKATQEVM*

Sequence

>CNT0033199
AGACAAACAGAAATAAGAAAAATATAGAGCAATATAAAACACAAGAACAACTCTATATTGGTCTACCCACACAAGAAAAAGACCTCTTTCCAACGCCACT
TATTGATGCTTACCAAAGGAGGTAGCCAAAACCCTAGAATACCCACAACCCATGAATGTTTCTAATATTTTGACAAGCCCTAATGGCACAATTAGTGGAA
GGCAACAAGGGTTGAGCCACATGGACCCCAATAACTAAGCCTTCACCAGCTTCGCTCTCTCCCCTGTTGCCAAATTAATGTCGGCAGCTCGATGCGTGAA
GAGCAACATAGGAGCAAGGCGCCAGTTTTGGAGAAAGGTGCCAGTTCTGGAACCATCGCCCTCATTGAAGGGAGAGAATTTGAGGGGGTTGTATTTAGAT
TTTCCTTCAACGGCGACGCAATCACGACGGATTCGAGACACACACGAGAGATCTCGTCTCAATTTTTTTTCTTCTTTTTTGTGTGTGTGTGTGTGTGTGT
GTGTTTGTATTAGTGCATCAGTTGCTGTGCCAACGCAACCCTTGACTCAGATACACCCTAATTGTTGGCACAAGTTGCCTCGGGACGAGCAACGTGAAGA
ATGAAATCATGTGTAATGCATGGAAATTTGTGGCATATTCTCTCGGTCTCAGCGTGTGTTAAAATATCTCGTCTCAACCCTATAAATTGGGTTGAATCAC
CCAGGGTTGTTGATTTCTATGGGTTGGGTAGGTGGGTGTTCCACGGCGTGCCTGCTGTTGGCTTCTTCAAAACTCGCGCGTCTTTCTCTTAATTTTTCTT
CAATGGTCCAAAAAGCCCGGAGAGGAAGCGGAATCTGACATAGGGCAAACGAACTATATTCACCAAGTATAAGCGTCAGAAACCAGAGATGGAATTGGAG
TTCTGCAGAAGTTGCCTTCACGCAAAACACAACATTCCTTACAAACTACACCATATGGATACATAGAAATGTATATATATTTTTTTGCTTTCTTCTTATC
GTCTTGTTCGATAACCAAGGTGTCAGGTAGCAAACTTGGGATCACATTTAGTCGGCACATTGTAGGGATGGCAAAACAAAATCCGTTGAGGATGACAGCA
CCTCATTATGATGAAACAGATACATAACAGCAAAGGCAGCAGCCCATGGAGCTTTCCTGCAACTTCAGATGTGGTCACTTCAGTTGAAATCATAAAAATT
GCCAAGAGATCGTGACATAGCTGATACCAGAACCCACACCGAACCCCGAAGTGCGTTAGTTACACTATAAGACATCAAATGCAGCACTAGCAATAAAACA
AGAAATAAAAACTTTTCGTCATCACTCTTCATCTTGTTCCAAATGTCAGAGCTAGTGTTACAACGGGATGAAAACTCTTCCATAACAAATTGATTTGAAT
ATCCTCAACCATGTTACAGAATTGATATTCTCCAAGTAAATGTCTGTATAACATGTCAAGTTAATTAAACTAAAGTAGTTCAAGAAATATAACGTTATTT
CAAAGACGTCTATGAACGCAAATATGCCACAGCTATTAAATGCAAAGGACTGTCTATCAAACAAGACCACTTATACCAGTAAAGCAACACAGGAAGTTAT
GTAGTAC