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Detailed information on CNT0034127


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0004985, E-value = 3e-10 (V. vinifera)
CNT0042889, E-value = 3e-10 (A. thaliana)
CNT0002061, E-value = 8e-08 (G. max)
CNT0023953, E-value = 9e-11 (A. trichopoda)
CNT0031800, E-value = 9e-11 (O. sativa)
CNT0011121, E-value = 3e-07 (S. tuberosum)
CNT0039778, E-value = 3e-10 (S. moellendorffii)

Expression of CNT0034127

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MSEVLSFAVSVHLIRSLYLLHLRLGCCGISLICCVTCLDVTLTWCKVMSS*

>peptide 2 (45 aa)
GRPAMAETGPFPLAQAFCRSRRRRRLSLSCVEDSEETITMSPFYY*

>peptide 3 (67 aa)
MYLCHLVSDARFVDVHYFSFLVSSLCRASRQSTCCDRSLLCSAGYYFRRRCIVSSVFYTAVALSTMC*

>peptide 4 (34 aa)
MVDILMSLVNALLSCCIDLFYYLIKNDILHCGEY*

>peptide 5 (30 aa)
AGPPWPRQAPSLSLKRFVAVVVVVVFHSPA*

>peptide 6 (33 aa)
QARHGRDRPLPSRSSVLSQSSSSSSFTLLRRGF*

>peptide 7 (43 aa)
MRALWTSTIFLFWFPLYAAPHGNPHVATAAYCVRQATIFAVVA*

Sequence

>CNT0034127
GGCAGGCCCGCCATGGCCGAGACAGGCCCCTTCCCTCTCGCTCAAGCGTTTTGTCGCAGTCGTCGTCGTCGTCGTCTTTCACTCTCCTGCGTAGAGGATT
CTGAAGAAACTATCACCATGTCACCTTTCTATTATTAGTATGTACCTGTGCCACCTAGTTTCCGATGCGCGCTTTGTGGACGTCCACTATTTTTCTTTTT
TGGTTTCCTCTTTATGCCGCGCCTCACGGCAATCCACATGTTGCGACCGCAGCTTACTGTGTTCGGCAGGCTACTATTTTCGCCGTCGTTGCATAGTTAG
CAGTGTATTTTACACAGCCGTGGCTTTATCAACGATGTGCTGATGTCTGAAGTTCTCTCATTTGCAGTGTCGGTGCACCTCATTCGATCACTGTACCTGT
TGCATCTGCGGCTTGGCTGCTGTGGGATCTCACTAATTTGTTGTGTGACCTGTTTGGATGTGACGTTGACGTGGTGCAAAGTAATGTCATCCTAGCCTGA
CGTGACAATCGCTGTTTGTGTCATGTGTGTGGATGTTTATGTATATAGATCTGTCTGTTGTTGAATTAGTTGGTAGTGGGGGGTCACGTTTTGCAAGAGG
GTTTTTTTGTGACATGTGACCACGTTCTCTGGGGCGCTATGCGAGGTGCTCCTTTCTGAATCCTTCTGTTTAGGCAGGGAACACTACTATGCATATCTTT
ACCTTCGTTACTGCGCATCAATTCCTGCTGTGAAATGTACCTTTTAAGAATTCCAGTTTCTCCTGCAGTAACTTCTATTGAAGGCTCCTGAGATATTGCT
GGTTCCTAATTGCAACTCGCTTCATTGTCTCTTTATGCATTTTCACTTGTACACTTAGTAGAAATTGTGCGAAGCGATTAGTTCCAACACGATTCTCACT
GGATTCGATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCACGCCATTCCTTTCTGTCGCGATTCCCTTTGTTATCAATGTCCACGAGCTGGACTGA
GTGATTTTCCCAAGGTACTTTGTTATGTATATCTTTCTCAAAAGACGTGTTGTCGGACCTTGGTTAAGTGTGTCCTGCTATCTGTGGTGATATTATTTTG
AGTCGTAGCGTCCATCGTGCAGCGAGTGTGAACGGTTGAGAGTTCCTTGTCTTTCGGGCCTGCTGATGTGTTTGGTTGGTGTGACAGTATTTGAACACTG
GCAGTCATGAACACACCTCACTGCTTCAGTGATTACATGTGTCGTGGTAGGCATCCTTAGAGTCGTAGGCCTCTGTGTGGAATTCAAGATAGTTCACAGT
CGTTTTGAACACACATCACAGGAGCCTACGACTCTGAAGATACCTATCTCGGGACAAATTTCTGGATTACGTCGATCTATCTCTATTCGGGAGTCATCAT
GATGGTGCCAACGTGGGAAACATGTCGTAGAGATTCCTTGTGTGAGATGTTCACTCCAAAGGACTGAAGATACTGCATTGGGGATTACATGATGCAAGCT
GCATTCGGGTAGTAGTCGACATCAATATAAAGCAGTAAACAAAGTTCACATCCATGTGCAGCTGACGGTGAAACTAGGCAGCCTTGCATACAAATGGTAG
ATATTCTAATGTCACTTGTCAATGCTCTGCTGTCATGCTGTATTGATCTATTCTATTACTTAATCAAAAATGATATATTGCACTGTGGCGAATATTAGAC
ATATAGAGAATTTCACTAATATGGAACAGCTTGTAAGATTGTAAACATTCTATATAAACACCGAACAGAATGCAATTTTTTTGAACGTCTAACTTATGAA
TAATTATTACATTTG