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Detailed information on CNT0034328


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0005713, E-value = 4e-17 (V. vinifera)
CNT0042563, E-value = 6e-10 (A. thaliana)
CNT0019093, E-value = 1e-10 (Z. mays)
CNT0002977, E-value = 6e-10 (G. max)
CNT0022663, E-value = 6e-10 (A. trichopoda)
CNT0030302, E-value = 7e-22 (O. sativa)
CNT0015837, E-value = 6e-16 (S. tuberosum)
CNT0035638, E-value = 9e-09 (C. reinhardtii)

Expression of CNT0034328

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MQVGRSLNKTRIQIKLIFSLGINTYISLSLSLSIYIYIYIYIYVCVCVCV*

>peptide 2 (85 aa)
QKLQRQLELQFRSNRRQSPRLRASEHKCHNQALEFIRDTVKQTVLFYLPYRVQCDEVQFMSSDQRQRQTHHLDCFLFGEFPSHRS*

Sequence

>CNT0034328
GTCAGAAACTACAACGTCAACTTGAACTGCAGTTTCGGTCCAATCGCAGACAGAGTCCTCGGTTGAGAGCATCAGAGCACAAGTGCCACAACCAGGCACT
AGAGTTCATCAGGGACACAGTGAAGCAAACAGTTCTTTTTTATCTTCCTTACAGAGTCCAATGCGACGAGGTCCAGTTCATGTCCTCCGACCAGCGACAA
CGTCAAACACATCACCTTGATTGTTTTCTTTTTGGGGAATTTCCTTCACATCGCAGCTAAGGTCTGATCAGGTATTGTGCAGGCGTGTTGATGCTTCGTT
GGAACCCAGCTGCCCATCTGCTGTACACGCACTCAGACTGAAGGGGAATAACAATCCAGCACCTGCATATCTCGTGAGCCATGAATGCAGTGAACAGACG
GAATCCCACGCCGTCTCTCTGTATACACACATACACACACACATACTTGCTCATATAAACAAACACACACAAACACACTCACACAAACAAACACGCACAA
ACACACACACACTCTCTACTTATTTGCTCCTTGTTAACGTCTCAGAGCTAAATGCATAGCCATGGTCTTAAATGCAAGTGGGTAGGAGTCTTAACAAAAC
CCGCATTCAAATAAAATTAATTTTCAGTCTTGGCATTAATACATATATTTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATAT
GTGTGTGTGTGTGTGTGTGTGTAACAGTTTGCACACTCGTATCTAACAATAAAAACCTTACAAATTTGTTTGTCCATTT