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Detailed information on CNT0035548


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0005582, E-value = 4e-06 (V. vinifera)
CNT0033314, E-value = 7e-08 (P. patens)
CNT0002951, E-value = 4e-09 (G. max)
CNT0023377, E-value = 7e-14 (A. trichopoda)
CNT0028147, E-value = 9e-26 (O. sativa)
CNT0039786, E-value = 1e-06 (S. moellendorffii)

Expression of CNT0035548

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MHPHLRQIRIGCLGMARQRSRILSTKPSVPTPYLYPIRSYSPL*

>peptide 2 (96 aa)
MCFRCWVVRCVLLFIRLVCCDDAIFSRDIHTHAPLASQTGTLLDITSLLKTAPGVPVGACVFNPSVMPYKLNTYIVFSRIYEAKNESLKCVDGRLR*

>peptide 3 (28 aa)
MREREREMCVCVCVCVCVCVCVCVCVCVC

>peptide 4 (290 aa)
MNKYGKVYVYVVLLLGAGLQRATVNTIISLHIFCDTDSHCTLSVGLPRPLLYAPASATDKNWVPWNGTSTFTYSKHKTFGPHTILVPDPKLFTIMSYQTS
QDLFFFREFNLRFKNKIHLSGGSASVLEGDFFVSVGHAKIHPGCLHQEAAGTHSVESSCAHIGANVTKLDVAFQYGSGGLHYPYDYGFFVYKFHAQPPYS
ISHVSNIYIPSIPYDVAGHTGVLFPLGLFRLRNGTIVISYGDQDQASRLLLLDAQFFDVATPIEQLLMPTSNFTIYTLPVTLSVLSRSSP*

>peptide 5 (34 aa)
MEQSLYRMATKIKHLGCCFWMRSFLTLPRLLNNY*

>peptide 6 (29 aa)
MGLVVCTILMIMVFSCISSMHNRLTVYLT*

Sequence

>CNT0035548
CTCTGGGTGCGGAGTAAGTGAGTGGCATACCTCCCTCGAGGTGATACATACGACATAATGACGGTTTCGTCTTTGCACGGACAATCCCTGTGAAACTCCC
CCCCCCGCAAACACCCACTGCTCGCAGCTGCGCACGCCTGTTATTAGAAAACAAAAAGTAGGAATGTGCTTCCGTTGTTGGGTTGTTCGATGTGTTCTTC
TATTTATTCGGCTTGTTTGTTGTGATGATGCAATATTTAGTCGGGACATACATACACACGCTCCACTTGCATCACAGACTGGAACATTACTAGATATCAC
GTCGCTCTTGAAGACAGCTCCAGGCGTGCCGGTGGGCGCGTGTGTCTTTAATCCATCGGTTATGCCCTATAAACTCAACACGTATATCGTCTTTTCACGT
ATTTATGAAGCAAAAAATGAGAGCTTGAAGTGTGTGGACGGGAGACTGCGTTAGCTTGACTTCGATTTAGCTGTTGGAAAACTTTTGGGGAGTCTATACA
TTGACCAATATAACCTCGAAGACGGTCGCCTTTTCATGAACAAATATGGTAAAGTTTATGTATACGTTGTGCTTCTGCTTGGCGCCGGTCTTCAGCGAGC
AACTGTGAACACAATCATTTCACTGCATATATTTTGTGATACAGACAGTCATTGCACACTAAGCGTCGGTTTGCCGAGGCCCCTTTTGTATGCACCCGCA
TCTGCGACAGATAAGAATTGGGTGCCTTGGAATGGCACGTCAACGTTCACGTATTCTAAGCACAAAACCTTCGGTCCCCACACCATACTTGTACCCGATC
CGAAGTTATTCACCATTATGAGTTACCAAACCTCTCAAGACCTTTTTTTTTTTAGAGAATTCAATTTACGTTTCAAAAATAAAATACATCTTTCTGGTGG
ATCAGCGTCCGTGCTTGAAGGTGATTTTTTTGTAAGCGTTGGACATGCCAAGATACATCCTGGGTGTTTGCACCAAGAAGCTGCTGGAACCCATTCTGTA
GAATCGTCTTGTGCACACATAGGTGCTAACGTTACAAAGCTCGACGTCGCATTTCAATATGGGTCTGGTGGTCTGCACTATCCTTATGATTATGGTTTTT
TCGTGTATAAGTTCCATGCACAACCGCCTTACAGTATATCTCACGTGAGTAATATATACATTCCTTCTATTCCATACGACGTTGCCGGTCATACCGGTGT
GTTGTTTCCATTGGGGCTGTTTAGATTGAGGAATGGAACAATCGTTATATCGTATGGCGACCAAGATCAAGCATCTCGGTTGTTGCTTTTGGATGCGCAG
TTTTTTGACGTTGCCACGCCTATTGAACAATTATTGATGCCAACTTCGAACTTTACGATTTATACATTACCGGTGACATTGTCCGTTTTATCACGTTCGT
CTCCCTGAACTATCATGAGAGAGAGAGAGAGAGAGATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TG