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Detailed information on CNT0035798


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|P69310|UBIQ_AVESA, E-value = 2e-16

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs:
CNT0005932, E-value = 1e-15 (V. vinifera)
CNT0033455, E-value = 2e-23 (P. patens)
CNT0019050, E-value = 2e-20 (Z. mays)
CNT0024494, E-value = 5e-36 (O. sativa)
CNT0009679, E-value = 5e-24 (S. tuberosum)

Expression of CNT0035798

Peptides detected in this lncRNA

>peptide 1 (113 aa)
LFTAFPRKQQSKSGRVEPKSDSACCYTACAKRSLQLIAANQNAHSQRPSAALLATAQAQHQVQGRLLLDVVVSQGAGSTPSGCCSQPGCGRPPAACRRRS
GAAGPGGCLCVGGG

>peptide 2 (71 aa)
SCSLHFQENSSPRVGESSRKVIAHVVTRRVPSVAFSSSLPTKTPTANVLQPLYWPPRRRSTRCRVDSFWML*

Sequence

>CNT0035798
AGCTGTTCACTGCATTTCCAAGAAAACAGCAGTCCAAGAGTGGGCGAGTCGAGCCGAAAAGTGATAGCGCATGTTGTTACACGGCGTGTGCCAAGCGTAG
CCTTCAGCTCATCGCTGCCAACCAAAACGCCCACAGCCAACGTCCTTCAGCCGCTTTACTGGCCACCGCGCAGGCGCAGCACCAGGTGCAGGGTCGACTC
CTTCTGGATGTTGTAGTCAGCCAGGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGAT
CAGGCGCTGCTGGTCCGGGGGGATGCCTGTGCGTAGGCGGGGGG